Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq2477 136 4e-27 seq1364 118 1e-21 >seq2477 Length=31422 Score = 136 bits (150), Expect = 4e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || ||||| || || || || || || || || | || Sbjct 19263 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCATCACTCTGGAGGTCGAGTCTTCC 19322 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| |||||||| |||||||| || Sbjct 19323 GACACGATCGACAACGTCAAGGCTAAGATCCAAGACAAGGAAGGAATTCCTCCCGACCAG 19382 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||| ||||||||||| ||||| || ||| | | | | | || ||||| ||| Sbjct 19383 CAGCGCTTGATTTTTGCCGGGAAGCAGCTCGAAGATGGGCGGACCCTCTCGGATTACAAC 19442 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 || || ||||| |||||||| || Sbjct 19443 ATCCAGAAGGAGTCGACACTTCA 19465 Score = 111 bits (122), Expect = 1e-19 Identities = 152/211 (72%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || | || || || || | Sbjct 18702 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTTGAGTCCTCT 18761 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||||||||| || || || || || Sbjct 18762 GACACGATTGATAATGTGAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCAG 18821 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||||||||||| || |||||||| || ||||| | | | | | || || || ||| Sbjct 18822 CAACGTTTGATCTTCGCTGGGAAACAACTCGAGGACGGGCGTACCCTCTCTGACTACAAC 18881 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGTG 24913 ||||| ||||| || || || || || |||| Sbjct 18882 ATTCAGAAGGAGTCTACCCTCCATCTCGGTG 18912 Score = 105 bits (116), Expect = 6e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | || || || || || || || ||||| | ||||| || | | Sbjct 18986 ATGCAAATCTTCGTCAAGACCCTGACGGGAAAGACCATTACCTTGGAAGTCGAGTCTTCA 19045 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || ||||| || Sbjct 19046 GACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 19105 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || |||||||||||||| || || ||||| ||||| | | | || ||||||||| Sbjct 19106 CAGCGTTTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGTACTCTTTCGGATTATAAC 19165 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| ||||| |||||||| || Sbjct 19166 ATTCAGAAGGAGTCGACACTCCA 19188 >seq1364 Length=53523 Score = 118 bits (130), Expect = 1e-21 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | |||||| | || || ||||| || || |||||||| ||| | | Sbjct 5621 ATGCAGATCTTTGTCAAAACGTTGACTGGGAAAACGATCACCCTCGAAGTTGAATCATCG 5562 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || |||| | || || |||||||| || || |||||||| || || || || Sbjct 5561 GATACTATAGACAATGTGAAGGCGAAGATCCAGGATAAGGAAGGAATTCCCCCAGACCAG 5502 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||| | ||||| || || || || ||||||||| | | | || || |||||| Sbjct 5501 CAACGCCTCATCTTCGCTGGAAAGCAACTGGAGGATGGTCGCACTCTATCTGACTATAAC 5442 Query 24884 ATTCAAAAGGAATCGACACTACA 24906 ||||| |||||||| ||| |||| Sbjct 5441 ATTCAGAAGGAATCTACATTACA 5419 Score = 100 bits (110), Expect = 3e-16 Identities = 139/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| || | || || |||||||| ||||| || || || || || || | || Sbjct 5393 ATGCAGATTTTCGTGAAGACTCTAACCGGGAAAACCATCACCCTTGAGGTTGAGTCTTCC 5334 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || || | || |||| || | ||| |||||||| ||||| || || ||||| ||||| Sbjct 5333 GATACCATCGACAACGTGAAGGCGAAA-ATCCAAGATAAAGAGGGGATTCCTCCTGATCA 5275 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||| || |||| || || ||||| ||| |||||||| | | | || || || || Sbjct 5274 ACAGCGCCTGATATTCGCGGGGAAGCAGTTGGAGGATGGACGTACTCTTTCTGACTACAA 5215 Query 24883 CATTCAAAAGGA 24894 |||||||||||| Sbjct 5214 CATTCAAAAGGA 5203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449832111780600