Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq2477 136 3e-27 seq1364 107 1e-18 seq142 82.4 5e-11 >seq2477 Length=31422 Score = 136 bits (150), Expect = 3e-27 Identities = 155/208 (75%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829 ||| ||||| |||||||| ||||| ||||| |||||||| ||| |||| |||| || | Sbjct 19698 CCAAGTGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGA 19639 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTA 34889 | ||||| || || |||||||| || || ||||| | || | ||||||||||| | | Sbjct 19638 GCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 19579 Query 34890 TTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTC 34949 | || |||||| | |||| ||| | |||||| || | ||| |||||||| | Sbjct 19578 TCTTCGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCC 19519 Query 34950 CCGTGAGGGTCTTTACAAAGATCTGCAT 34977 | ||||||||||| || || |||||||| Sbjct 19518 CGGTGAGGGTCTTGACGAATATCTGCAT 19491 Score = 116 bits (128), Expect = 2e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 ||||||||||||||| ||||| || ||| | ||| | || || ||||| || || ||||| Sbjct 18893 CTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGTTGTTTCCCAGCGAA 18834 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| ||||||||||| | || | || || ||||| | || || || || Sbjct 18833 GATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTCACATT 18774 Query 34906 TGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTAC 34965 | |||| ||| || ||| || || | || |||||||| |||||||||||||| || Sbjct 18773 ATCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGAC 18714 Query 34966 AAAGATCTGCAT 34977 ||||||||||| Sbjct 18713 GAAGATCTGCAT 18702 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| || ||||||||| ||||| || ||||| ||| | ||| |||| Sbjct 19474 AGGACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTCCGCCCATCT 19415 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| || |||| || |||||||| | || | || |||||||| Sbjct 19414 TCGAGCTGCTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCT 19355 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | || |||||| Sbjct 19354 TGGATCTTAGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCCAGAGTGATGGTC 19295 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| ||||| |||||||||||||| Sbjct 19294 TTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 19263 Score = 109 bits (120), Expect = 4e-19 Identities = 143/196 (73%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845 |||||||||||||||||| ||||| || | || | || || || ||||| || || || Sbjct 19177 CTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGAGCTGCTTGCCAGCAAA 19118 Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905 ||||| || |||||||| | || | ||||||||||| | || || ||||| | Sbjct 19117 GATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTAGCCTTGAC--A 19060 Query 34906 TGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCT 34961 | | ||||| || | |||||| || | ||| |||||||||||||| ||||||| Sbjct 19059 T--TGTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTCCCGTCAGGGTCT 19002 Query 34962 TTACAAAGATCTGCAT 34977 | || ||||| ||||| Sbjct 19001 TGACGAAGATTTGCAT 18986 Score = 82.4 bits (90), Expect = 5e-11 Identities = 87/115 (76%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 |||| || || | | |||||| ||||||| || |||||||||||| || || || | Sbjct 18702 TTCCGCCTCTGAGGCGCAGGACGAGGTGAAGAGTCGACTCCTTCTGAATATTGTAATCAG 18643 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 | ||| ||||| |||| || || ||||| || |||||||||| || ||||| || Sbjct 18642 AAAGGGTGCGCCCATCCTCGAGCTGCTTCCCAGCGAAGATCAAACGCTGCTGATC 18588 >seq1364 Length=53523 Score = 107 bits (118), Expect = 1e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||||||||||||||| ||||| |||| |||| |||||||||||||| |||||| Sbjct 5431 TCCTTCTGAATGTTATAGTCAGATAGAGTGCGACCATCCTCCAGTTGCTTTCCAGCGAAG 5490 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || |||||||||||| | || | || ||||| || | || || || || Sbjct 5491 ATGAGGCGTTGCTGGTCTGGGGGAATTCCTTCCTTATCCTGGATCTTCGCCTTCACATTG 5550 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||| | || | || || || | ||| || || || || || | || || ||| Sbjct 5551 TCTATAGTATCCGATGATTCAACTTCGAGGGTGATCGTTTTCCCAGTCAACGTTTTGACA 5610 Query 34967 AAGATCTGCATG 34978 |||||||||||| Sbjct 5611 AAGATCTGCATG 5622 Score = 96.9 bits (106), Expect = 2e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 || |||| |||||||||||| |||||||| ||||| || || | || |||| |||| Sbjct 5188 AGATGAAGGGTGCTCTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTCCAAC 5247 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || ||||| ||||| || || || || | || | |||||| || || | ||| Sbjct 5248 TGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTGGATT 5307 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || || ||| | || | || | ||| || |||| ||| ||||| || || Sbjct 5308 TTCGCCTTCACGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTTTCCCG 5367 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || || ||||| || || |||||||| Sbjct 5368 GTTAGAGTCTTCACGAAAATCTGCAT 5393 >seq142 Length=14559 Score = 82.4 bits (90), Expect = 5e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| || |||| ||| |||||| || ||||| ||||| ||| |||| |||| Sbjct 5212 AGGACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGCTGAGGGTGCGACCATCC 5271 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 ||||| ||||| |||||||||||||| |||||||| || Sbjct 5272 TCCAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGATC 5309 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325646576558255