Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq2477 109 4e-19 seq1364 105 5e-18 >seq2477 Length=31422 Score = 109 bits (120), Expect = 4e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 29579 CCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGA 29638 ||| ||| || || || || || |||||||||||||||| || || ||| || |||| Sbjct 19193 CCAGATGGAGTGTCGACTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGA 19134 Query 29639 GTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTA 29698 | || ||||||||| | ||||| | ||||| || || ||||||||||| ||||| || | Sbjct 19133 GCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGA 19074 Query 29699 ATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGC 29758 || |||||| | || | ||||| ||| || ||||| | || || || || | Sbjct 19073 TCTTAGCCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTC 19014 Query 29759 CAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || | ||| || || || || ||||| Sbjct 19013 CCGTCAGGGTCTTGACGAAGATTTGCAT 18986 Score = 100 bits (110), Expect = 2e-16 Identities = 149/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 29579 CCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGA 29638 |||| ||||| ||| ||||| || ||||| || |||| | ||||||| ||| |||| Sbjct 19698 CCAAGTGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGA 19639 Query 29639 GTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTA 29698 | || ||||||||| | |||| | || || || || || || ||||| ||||| || | Sbjct 19638 GCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTG-A 19580 Query 29699 ATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757 || || | ||||| | || | |||||||| || || || || || || || || Sbjct 19579 ATCTTCGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTC 19520 Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || | ||| || || ||||||||||| Sbjct 19519 CCGGTGAGGGTCTTGACGAATATCTGCAT 19491 Score = 95.1 bits (104), Expect = 9e-15 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 29583 ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGAGTTG 29642 ||| || || || || || |||||||| || || | | ||| || || |||||||| Sbjct 18905 ATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGTTG 18846 Query 29643 TTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTAATTT 29702 ||| ||||| | ||||| | |||||| || || || || || ||||||||||| | || Sbjct 18845 TTTCCCAGCGAAGATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATCTT 18786 Query 29703 TTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGT 29762 || ||| | || | |||||||| || || || | ||| || || ||||| || Sbjct 18785 GGCCTTCACATTATCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCCGT 18726 Query 29763 TAAGGTTTTAACAAATATCTGCATT 29787 | ||| || || || ||||||||| Sbjct 18725 GAGGGTCTTGACGAAGATCTGCATT 18701 >seq1364 Length=53523 Score = 105 bits (116), Expect = 5e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 29559 TCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGC 29618 ||| || | || || || || | ||| | || ||||| || ||||||||||| || | Sbjct 5394 TCCACCACGCAGGCGGAGAACGAGATGTAATGTAGATTCCTTCTGAATGTTATAGTCAGA 5453 Query 29619 AATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGG 29678 | |||||| ||| || ||||| || ||||| | || | | |||||| || || || Sbjct 5454 TAGAGTGCGACCATCCTCCAGTTGCTTTCCAGCGAAGATGAGGCGTTGCTGGTCTGGGGG 5513 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 ||| || || || || || | || || ||| | |||| ||| || || ||| || Sbjct 5514 AATTCCTTCCTTATCCTGGATCTTCGCCTTCACATTGTCTATAGTATCCGATGATTCAAC 5573 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 ||| || || || ||||| ||||| || ||||| ||||| |||||||| Sbjct 5574 TTCGAGGGTGATCGTTTTCCCAGTCAACGTTTTGACAAAGATCTGCAT 5621 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/211 (69%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 29578 ACCAA-ATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||||| |||||| ||| || ||||||||||| || || | || || || ||| || Sbjct 5184 ACCAAGATGAAGGGTGCTCTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTC 5243 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 | || || || || |||||| | || ||||| || ||||| |||||||| ||||| Sbjct 5244 CAACTGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTG 5303 Query 29697 TAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTT 29756 | ||| || || | || | || || ||| || || ||||| || || ||||| Sbjct 5304 GATTTTCGCCTTCACGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTTT 5363 Query 29757 GCCAGTTAAGGTTTTAACAAATATCTGCATT 29787 || |||| || || || || ||||||||| Sbjct 5364 CCCGGTTAGAGTCTTCACGAAAATCTGCATT 5394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385164528366945