Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1235 104 2e-16 seq585 95.1 9e-14 >seq1235 Length=84146 Score = 104 bits (114), Expect = 2e-16 Identities = 229/342 (67%), Gaps = 1/342 (0%) Strand=Plus/Minus Query 282138 AATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAA 282197 || || |||| | ||| | |||||| || | ||| | | || || | || || | Sbjct 69832 AACCTTTTTTGTTTTTGCGCTTGAACTCCTGAACGAAGTGGTTGACGAGTCTGTTGTCGA 69773 Query 282198 AATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTT 282257 |||| || ||||||| | ||| | || | || ||| | |||| || | || || | Sbjct 69772 AATCCTCGCCTCCCAGATGAGTGTCACCAGCAGTGGCTTTGACTTCAAAGATACCTTCCT 69713 Query 282258 CAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCA 282317 | | | ||| |||| || || |||||| ||||| | |||||| || || || || Sbjct 69712 CGATGGTCAAGAGAGACACGTCGAAGGTTCCTCCACCGAGATCAAAGATGAGGACGTTGC 69653 Query 282318 TTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAA 282377 ||| | | || || |||||||| || || | || || || || || || || | Sbjct 69652 GTTCACCGACAACCTTCTTGTCAAGACCGTAGGCTATGGCGGCTGCCGTGGGCTCGTTGA 69593 Query 282378 TAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTG 282437 | || | | ||||| | |||| || | || ||||| ||||||||||||| || | Sbjct 69592 TGATACGAAGCACATTCATGCCAGAGATAGTCCCAGCATCCTTAGTGGCTTGTCGCTGGG 69533 Query 282438 AATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTA 282479 ||||||| || || || || ||||||| |||||||| ||||| Sbjct 69532 AATCGTTGAAGTAGGCTGGTACAGTAACAACGGCAT-TGTTA 69492 >seq585 Length=70684 Score = 95.1 bits (104), Expect = 9e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 282337 ATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAG 282396 ||| ||||||||||||| ||||| || || |||||||| || | || | || | || Sbjct 62862 ATCCAGACCATACGCAAGGGCAGCTGCGGTGGGTTCATTGATGACTCGGAGGACGTCTAG 62803 Query 282397 ACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGG 282456 |||||| || || || ||||| || ||||| | ||| | ||||| || || ||||| Sbjct 62802 ACCAGCGATCTGACCAGCGTCTTTCGTCGCTTGGCGTTGGGCGTCGTTGAAGTAAGCAGG 62743 Query 282457 AACAGTAATAACGGCAT 282473 |||||||||||||||| Sbjct 62742 GACAGTAATAACGGCAT 62726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740058679711770