Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1364 163 6e-35 seq2477 116 7e-21 seq8065 84.2 4e-11 >seq1364 Length=53523 Score = 163 bits (180), Expect = 6e-35 Identities = 165/215 (77%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | || | |||||||| ||||| || ||||| ||||||||| | | ||| Sbjct 5407 CGGAGAACGAGATGTAATGTAGATTCCTTCTGAATGTTATAGTCAGATAGAGTGCGACCA 5466 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 || || ||||| |||||||| ||||| || | ||| || ||||| || |||||||||||| Sbjct 5467 TCCTCCAGTTGCTTTCCAGCGAAGATGAGGCGTTGCTGGTCTGGGGGAATTCCTTCCTTA 5526 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| || || ||||| || || ||||| | ||| ||||| | || ||| Sbjct 5527 TCCTGGATCTTCGCCTTCACATTGTCTATAGTATCCGATGATTCAACTTCGAGGGTGATC 5586 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || || |||||||| || ||||| |||||||| Sbjct 5587 GTTTTCCCAGTCAACGTTTTGACAAAGATCTGCAT 5621 >seq2477 Length=31422 Score = 116 bits (128), Expect = 7e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || | || || || || || ||||| || || ||||| | Sbjct 19491 TACCACCCCGAAGACGGAGGACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAATCCG 19432 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | || ||||| || || || || ||||| || | | || || || |||| Sbjct 19431 AGAGGGTCCGCCCATCTTCGAGCTGCTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGGAG 19372 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||||||||| ||||| ||||| || || || || || ||||| || || || | Sbjct 19371 GAATTCCTTCCTTGTCTTGGATCTTAGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGA 19312 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | |||| ||| || |||||||| || | ||||| ||||| |||||||| Sbjct 19311 CCTCCAGAGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 19263 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || || || ||||| || |||||||| || ||| | | |||||| || || || Sbjct 19188 TGGAGTGTCGACTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGAGCTGC 19129 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTTT 82727 || ||||||||||| | | || || || || || || || ||||| || || ||||| Sbjct 19128 TTGCCAGCAAAGATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTA 19069 Query 82728 GCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTC 82787 || || ||||| || || || || || || |||||||| || || ||||| || ||| Sbjct 19068 GCCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTCCCGTC 19009 Query 82788 AACGTCTTTACAAATATCTGCAT 82810 | ||||| || || || ||||| Sbjct 19008 AGGGTCTTGACGAAGATTTGCAT 18986 Score = 111 bits (122), Expect = 3e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 82605 AAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGT 82664 ||||| ||||| |||||||| || || || || || || | | ||| || || || Sbjct 19696 AAGTGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGAGC 19637 Query 82665 TGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATC 82724 || || ||||||||||| || | ||||| || || || || || ||||| || |||||| Sbjct 19636 TGCTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATC 19577 Query 82725 TTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCT 82784 || || || || || || ||||| ||| | || || |||| || || ||||| || Sbjct 19576 TTCGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCCCG 19517 Query 82785 GTCAACGTCTTTACAAATATCTGCAT 82810 || | ||||| || ||||||||||| Sbjct 19516 GTGAGGGTCTTGACGAATATCTGCAT 19491 >seq8065 Length=1823 Score = 84.2 bits (92), Expect = 4e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Plus Query 82653 CCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCC 82712 |||||||| ||||||||||| ||||||| |||||||||||||| ||||| || || ||| Sbjct 1676 CCGTCTTCAAGTTGTTTTCCGTCAAAGATAAGTCTTTGTTGATCAGGAGGAATACCCTCC 1735 Query 82713 TTATCTTGAAT 82723 || ||||| || Sbjct 1736 TTGTCTTGTAT 1746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981680709847655