Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq1364 91.5 1e-13 seq2477 84.2 1e-11 >seq1364 Length=53523 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 33559 TCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAA 33618 || || || ||||| || || || || ||||| | || |||| ||| ||||| || || Sbjct 5431 TCCTTCTGAATGTTATAGTCAGATAGAGTGCGACCATCCTCCAGTTGCTTTCCAGCGAAG 5490 Query 33619 ATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATA 33678 || | || ||||| ||| | || | ||||| || || || ||| |||| ||| Sbjct 5491 ATGAGGCGTTGCTGGTCTGGGGGAATTCCTTCCTTATCCTGGATCTTCGCCTTCA-CATT 5549 Query 33679 GTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTAC 33737 ||| | || || |||||| || || | ||||||||||| || || |||||||| || Sbjct 5550 GTCTATAGTATCCGATGATTCAACTTCGAGGGTGATCGTTTTCCCAGTCAACGTTTTGAC 5609 Query 33738 AAAGATCTGCAT 33749 |||||||||||| Sbjct 5610 AAAGATCTGCAT 5621 >seq2477 Length=31422 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| || || ||| || || ||||||||||| || Sbjct 19490 ACCACCCCGAAGACGGAGGACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAATCCGA 19431 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || || | || || |||||||||||||| |||||||| || | || Sbjct 19430 GAGGGTCCGCCCATCTTCGAGCTGCTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGGAGG 19371 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || | | || | ||| | |||||| || || | Sbjct 19370 AATTCCTTCCTTGTCTTGGATCTT-AGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGA 19312 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||| || || || || | || || ||||||||||||||| Sbjct 19311 CCTCCAGAGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCATA 19262 Score = 84.2 bits (92), Expect = 1e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 33542 CCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCA 33601 |||| || |||||||||||||| || |||||||| || ||||| ||||| | || || | Sbjct 19698 CCAAGTGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGA 19639 Query 33602 ATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAA 33661 || || || ||||| |||| |||||| || || | || | || || ||||| || Sbjct 19638 GCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 19579 Query 33662 TTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTA 33720 | ||| | | || | ||| | ||||| || || || || | ||||| || || Sbjct 19578 TCTTC-GCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTC 19520 Query 33721 CCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | || || || || ||||||||| Sbjct 19519 CCGGTGAGGGTCTTGACGAATATCTGCATA 19490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328657349198400