Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq1364 89.7 1e-12 >seq1364 Length=53523 Score = 89.7 bits (98), Expect = 1e-12 Identities = 144/207 (70%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| ||| ||||||| | || || ||||||||||| | ||||| ||| || || Sbjct 5618 CAGATCTTTGTCAAAACGTTGACTGGGAAAACGATCACCCTCGAAGTTGAATCATCGGAT 5559 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || | || || ||| ||||| || || || ||||||||| || ||| ||| Sbjct 5558 ACTATAGACAATGTGAAGGCGAAGATCCAGGATAAGGAAGGAATTCCCCCAGACCAGCAA 5499 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | || |||||||| |||||||| |||| ||||| | ||| | | || || ||| | Sbjct 5498 CGCCTCATCTTCGCTGGAAAGCAACTGGAGGATGGTCGCACTCTATCTGACTATAACATT 5439 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTT 206379 ||||| || ||||| | || || ||| Sbjct 5438 CAGAAGGAATCTACATTACATCTCGTT 5412 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 204764 ACAAGGTGAAGAGTAGACTCTTTCTGGACATTATAGTCAGCCAAAGTCCTTCCATCTTCC 204823 |||||||| || |||||||||||||| | || || |||| ||| || | ||||| || Sbjct 5641 ACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGACAAGGTTCGACCATCCTCG 5700 Query 204824 AGCTGCTTTCCGGCGAAGATAAGCCGTTGTTG 204855 ||||| ||||| ||||||||||| |||||||| Sbjct 5701 AGCTGTTTTCCAGCGAAGATAAGACGTTGTTG 5732 Score = 84.2 bits (92), Expect = 5e-11 Identities = 72/89 (81%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 206290 CAAAGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAAC 206349 ||| | ||||||||||| ||||| ||| | || ||||| | || ||| | ||||||||| Sbjct 5729 CAACGTCTTATCTTCGCTGGAAAACAGCTCGAGGATGGTCGAACCTTGTCTGATTACAAC 5670 Query 206350 GTCCAGAAAGAGTCTACTCTTCACCTTGT 206378 | |||||||||||||| || |||||||| Sbjct 5669 ATTCAGAAAGAGTCTACCCTCCACCTTGT 5641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181644470490045