Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq6557 136 5e-27 seq1875 107 2e-18 >seq6557 Length=2833 Score = 136 bits (150), Expect = 5e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 147231 CAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAA 147290 |||||||||||| |||| || | ||| | | |||| ||||| ||| || || || Sbjct 1227 CAGCTGGTCCACCCCCTCCCCGCTGTAATCCCGCTCGCAATCCACATACTCCGCGCCGAA 1168 Query 147291 GTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAGCC 147350 || | ||||||||| |||||||| |||||||||||||| | | | |||||| | ||| Sbjct 1167 ATGGCGCCACTGGAACCCGTACACCGGCCCCAGGTCGCCCGCCCTCCTGTGCCCCAGGCC 1108 Query 147351 CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGCGGA 147410 | || || ||| ||| | ||||||| | |||||||||| ||| ||| | ||||| Sbjct 1107 CCTCCCCTCGAGGAACGCCTTCGACCCGTTGCCGTCCCAGATCTTCACGCCCCTCGCGGA 1048 Query 147411 GAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTC 147458 ||| | |||||| ||||| || | |||||||||||||||||| Sbjct 1047 GAGGAGGGCGGCGTCCGTCGAGCCGCGCACGAACCAGAGCAGCTCCTC 1000 Score = 104 bits (114), Expect = 3e-17 Identities = 214/319 (67%), Gaps = 36/319 (11%) Strand=Plus/Minus Query 146877 GAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTT 146936 |||||| ||||| || || || | | |||||| || ||||| | ||||||| Sbjct 1666 GAGCTTCGGGAACGGCCGCGGCTCGCGCTGCAGCTGCTCTTCCAGGGCGGCGACGTGGTC 1607 Query 146937 GAGGTAGACGTGCGCGTCCCCCAGGGTG-TGCACAAAGTCCCCCGGCTTAAG-GCCGGTC 146994 | |||| ||||||||||| || || | || || || | |||| | | ||| || Sbjct 1606 GCGGTACACGTGCGCGTCGCCGAGCTGGATGATCA--GTTCTGCGGCGTCGGTGCCCGTG 1549 Query 146995 ACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGG 147054 ||||| || | ||||| |||||||||| |||| || |||||||| |||| || || Sbjct 1548 ACGTGCGCGAGCATGTGCGTGAGCAGCGCGTAGGACGCGATGTTGAACGGGATGCCGAGC 1489 Query 147055 CCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGC----------TCCCCGTCGGC 147104 |||| ||| | || | |||||||| | ||||||||||| |||| | ||| Sbjct 1488 CCCAGGTCTGCGGAGCGCTGGTACATCAGGCACGAGAGCTTGGGCTTCGTCCCTGGTGGC 1429 Query 147105 --------------------CACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCC 147144 |||||| || |||||||| |||||||||||||| |||||| Sbjct 1428 GAGGAGGCGGGCGGGAGGCGCACGTAGAATTGGCACAGCATGTGGCACGGCGGGAGCGCC 1369 Query 147145 ATG-GCGGGCAGGTCCGCG 147162 ||| ||||| | ||| ||| Sbjct 1368 ATGAGCGGG-ATGTCTGCG 1351 >seq1875 Length=13504 Score = 107 bits (118), Expect = 2e-18 Identities = 165/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 147228 CCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCC 147287 || |||||||||||| |||| ||||| || | | |||| ||||| ||| || || Sbjct 12294 CCGCAGCTGGTCCACCCCCTCCCCCCCATAATCCCGCTCGCAATCCACATACTCCGCGCC 12353 Query 147288 AAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGC---CGGGCTTTCTGTGCGA 147344 ||| || | ||||||||| || ||||| || |||| |||| || || || ||| Sbjct 12354 AAAATGGCGCCACTGGAACCCATACACCGGGCCCAAATCGCCCTCGCGC---CTATGCCC 12410 Query 147345 GAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTT 147404 | |||| | || ||| ||| | ||||||| | |||||||||| ||| ||||| Sbjct 12411 CAGGCCCCGCGCCTCGAGGAACGCCTTCGACCCGTTGCCGTCCCAGATCTTCACGCCCTT 12470 Query 147405 GGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTC 147458 || || || | |||||||| ||||| || | |||||| ||||||||||| Sbjct 12471 CGCCGACAGAAGTGTGGAGTCCGTCGAGCCGCGCACGAACCACAGCAGCTCCTC 12524 Score = 96.9 bits (106), Expect = 4e-15 Identities = 166/245 (68%), Gaps = 27/245 (11%) Strand=Plus/Plus Query 146929 ACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGG 146988 ||||||| | |||| ||||||||||| || || | || | ||| | | || | Sbjct 11904 ACGTGGTCGCGGTACACGTGCGCGTCGCCGAGCTGGATGACGAGCTCCGCGGCCTCGGTG 11963 Query 146989 CCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACC 147048 || || ||||| || | ||||| |||||||||| ||| || |||||||| |||| | Sbjct 11964 CCCGTGACGTGCGCGAGCATGTGCGTGAGCAGCGCGTACGACGCGATGTTGAACGGGATC 12023 Query 147049 CCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAG-CTCCCCGTC------ 147101 || || |||| |||| | || | |||||||| | |||||||||| ||| | || Sbjct 12024 CCGAGCCCCAGGTCCGCGGAGCGCTGGTACATCAGGCACGAGAGCCTCGGCTTCTCGGAG 12083 Query 147102 --------GGC------------CACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGC 147141 ||| |||||| |||||||||| |||||||||||||| ||| Sbjct 12084 GGGGAGGAGGCGGGCGGCAGGCGCACGTAGAACTGGCACATCATGTGGCACGGCGGGAGC 12143 Query 147142 GCCAT 147146 ||||| Sbjct 12144 GCCAT 12148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583403066028000