Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq2477 120 3e-22 seq1364 104 2e-17 >seq2477 Length=31422 Score = 120 bits (132), Expect = 3e-22 Identities = 144/193 (75%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | | ||| ||| | || || |||||||| || ||||| Sbjct 19454 CTCCTTCTGGATGTTGTAATCCGAGAGGGTCCGCCCATCTTCGAGCTGCTTCCCGGCAAA 19395 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | ||||| | |||||||| |||||| ||| | || Sbjct 19394 AATCAAGCGCTGCTGGTCGGGAGGAATTCCTTCCTTGTCTTGGATCTTAGCCTTGA-CGT 19336 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||||| || || ||||||| ||||| || || || || | ||| || | Sbjct 19335 TGTCGATCGTGTCGGAAGACTCGACCTCCAGAGTGATGGTCTTGCCGGTGAGAGTCTTGA 19276 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 19275 CAAAGATCTGCAT 19263 Score = 100 bits (110), Expect = 3e-16 Identities = 149/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 35529 CCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCA 35588 |||| || | || ||||| || || |||||||| || | | ||| || | || || | Sbjct 19698 CCAAGTGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGA 19639 Query 35589 GCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGA 35648 ||||||| || ||||| |||| ||||| ||||| | || | || |||||||||| | Sbjct 19638 GCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 19579 Query 35649 TCTTTTGCTTCAGAGTTGCC-ACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 |||| ||| | |||| | | |||||| ||| || ||||||| ||||| || || Sbjct 19578 TCTTCGCCTTGAC-GTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTC 19520 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || || | || || || ||||||||||| Sbjct 19519 CCGGTGAGGGTCTTGACGAATATCTGCAT 19491 Score = 98.7 bits (108), Expect = 9e-16 Identities = 138/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||||||||| || | | ||| ||| |||| || || || || || || || Sbjct 18893 CTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGTTGTTTCCCAGCGAA 18834 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| || |||||||| | || | || || ||||| |||||| ||||| | | Sbjct 18833 GATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTCACATT 18774 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| || || ||||||| ||||| || || ||||| | || || || Sbjct 18773 ATCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGAC 18714 Query 35725 AAATATCTGCATTC 35738 || |||||||||| Sbjct 18713 GAAGATCTGCATTC 18700 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||| ||||| | | || || |||| || |||||||| || ||||| Sbjct 19177 CTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGAGCTGCTTGCCAGCAAA 19118 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | |||| | |||||||||| |||||| ||| | | | Sbjct 19117 GATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTAGCCTTGACATT 19058 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || || || |||| || || || || ||||||| || || || Sbjct 19057 GTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTCCCGTCAGGGTCTTGAC 18998 Query 35725 AAATATCTGCAT 35736 || || ||||| Sbjct 18997 GAAGATTTGCAT 18986 >seq1364 Length=53523 Score = 104 bits (114), Expect = 2e-17 Identities = 153/213 (72%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 35528 ACCAA-ATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTC 35586 ||||| ||| | || |||||||||||||||||||| || | | || || | || || Sbjct 5184 ACCAAGATGAAGGGTGCTCTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTC 5243 Query 35587 CAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCAT 35646 || |||||| ||||| ||||||| ||||| || || | ||||| | ||| || || Sbjct 5244 CAACTGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTG 5303 Query 35647 GATCTTTTGCTTCAGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTT 35705 ||| || ||||| |||| | | || ||| || || ||||| | ||||| |||| Sbjct 5304 GATTTTCGCCTTCA-CGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTT 5362 Query 35706 TACCCGTCAAAGTTTTCACAAATATCTGCATTC 35738 | || || | ||| ||||| || |||||||||| Sbjct 5363 TCCCGGTTAGAGTCTTCACGAAAATCTGCATTC 5395 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 35508 TTCCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGG 35567 |||||||||| | | | || | |||||| ||| ||||| |||||||| || || | Sbjct 5393 TTCCACCACGCAGGCGGAGAACGAGATGTAATGTAGATTCCTTCTGAATGTTATAGTCAG 5452 Query 35568 CCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAG 35627 | || || | || ||||| ||||| || || || || | || |||||||| | | Sbjct 5453 ATAGAGTGCGACCATCCTCCAGTTGCTTTCCAGCGAAGATGAGGCGTTGCTGGTCTGGGG 5512 Query 35628 GAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCA 35687 ||| | ||||| ||| |||||| ||||| | | | | || || ||||| | Sbjct 5513 GAATTCCTTCCTTATCCTGGATCTTCGCCTTCACATTGTCTATAGTATCCGATGATTCAA 5572 Query 35688 CCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 | || | ||||||||||| || ||||| ||||| ||||| |||||||| Sbjct 5573 CTTCGAGGGTGATCGTTTTCCCAGTCAACGTTTTGACAAAGATCTGCAT 5621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450727981356600