Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq168 159 3e-34 >seq168 Length=158170 Score = 159 bits (176), Expect = 3e-34 Identities = 385/569 (68%), Gaps = 24/569 (4%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || |||||||||||||| || || ||||||| || ||||| || || || | || | Sbjct 53546 ATCTGGCAAATGTACAAGAAGGCTGAGGCGTCTTTCTGGACTGCGGAGGAGATGGACCTC 53487 Query 43790 ACTAAAGACTTAGCAC-ATTGGATTG--CATTAAAACCACAA-GAAAAACATTTTATATC 43845 | ||||| | ||| | |||| | | ||| |||| || ||||| || || Sbjct 53486 TCCAAAGATATC-CACGACTGGACCAACCGTCTAAATGACAACGAGCGTCATTTCATCTC 53428 Query 43846 TTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAA---TTTGGTTAG 43902 ||| | || || || ||||| || || || ||||| || || | ||| || Sbjct 53427 GCACGTTCTTGCTTTCTTCGCTGCCTCTGATGGTATTGTCAACGAGAACCTTCTGGAGAG 53368 Query 43903 TCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGC 43962 |||| | | ||||| ||| | | || || || ||||| ||||| || ||||| Sbjct 53367 ---GTTTTCAAATGAAGTCCAAGTTGCCGAGGCGCGCTGTTTCTATGGCTTCCAAATCAT 53311 Query 43963 CATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGG 44022 || || || || ||||| ||| || ||||| || || || || ||||| |||| Sbjct 53310 GATGGAGAACATCCATTCCGAAGCCTATTCGCTTCTCATCGACACTTATATCAAGGATGC 53251 Query 44023 G---CA-CGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATA 44078 || || ||| ||| | ||| |||| || || || | ||| || || | | Sbjct 53250 TACTCAGCGTGAAT-ATC---TCTTTGATGCCATCGAGACGATTCCTTGCATCAAGCGCA 53195 Query 44079 AAGCAGACTGGGCCCTTAAATGGAT---AAATTC-AAATGATTCTTTTGGAGAACGACTT 44134 | ||||| ||||||||| | ||||| | || |||| | | ||||| ||||| || Sbjct 53194 AGGCAGAATGGGCCCTTGAGTGGATTTCAGATAAGAAATCAA-CATTTGGCGAACGCCTC 53136 Query 44135 GTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGG 44194 || ||||| || | ||| || || |||||||| || |||||||||||| | || || ||| Sbjct 53135 GTTGCGTTCGCTGCTGTAGAGGGTATTTTCTTCTCTGGATCGTTTGCGTCAATCTTCTGG 53076 Query 44195 TTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGAT 44254 | ||||| || || ||||||||||| | || ||||| || || | || ||||||||| Sbjct 53075 ATGAAGAAGCGTGGCTTGATGCCTGGACTTACTTTTTCCAACGAACTTATCAGTCGTGAT 53016 Query 44255 GAAGGCTTACATTGCGATTTTGCTTGCTT 44283 |||||| | || ||||||||| ||||| Sbjct 53015 GAAGGCATGCACACCGATTTTGCGTGCTT 52987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397399591678225