Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq168 109 7e-19 >seq168 Length=158170 Score = 109 bits (120), Expect = 7e-19 Identities = 354/539 (66%), Gaps = 17/539 (3%) Strand=Plus/Plus Query 130002 TGAAGAGTTC-CACGGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTC 130060 |||||||| |||| |||| || ||| | || || ||||| ||| ||||| || Sbjct 52979 TGAAGAGTAAGCACG-CAAAATCGGTGTGCATGCCTTCATCACGACTGATAAGTTCGTTG 53037 Query 130061 GAGAAGCACAGACCTGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAG 130120 || || || || ||||| | || |||||||||| |||||| || | ||| || Sbjct 53038 GAAAAAGTAAGTCCAGGCATCAAGCCACGCTTCTTCATCCAGAAGATTGACGCAAACGAT 53097 Query 130121 CCAGAGAAGAAGATCCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGG 130180 ||||||||||| || ||||| ||| |||||||||| ||| || || |||| | Sbjct 53098 CCAGAGAAGAAAATACCCTCTACAGCAGCGAACGCAACGAGGCGTTCGCCAAATG---TT 53154 Query 130181 GACTTTGTATC---AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACG 130237 || || |||| || ||||| | ||||| | ||||| || ||| || || | Sbjct 53155 GATTTCTTATCTGAAATCCACTCAAGGGCCCATTCTGCCTTGCGCTTGATGCAAGGAATC 53214 Query 130238 GTCTGGATCGCTTCAAAGAGTTCCTTCTTTTCTGA--TGGATCTTTGATGTACTTATCTA 130295 |||| ||| || |||||||| | ||| |||| | ||| ||||| || | || | Sbjct 53215 GTCTCGATGGCATCAAAGAGAT-ATTC-ACGCTGAGTAGCATCCTTGATATAAGTGTCGA 53272 Query 130296 TGAGTTTTGAATATGTTTCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAA 130354 |||| ||||| | |||| ||||| | | ||| || | || | | |||||| Sbjct 53273 TGAGAAGCGAATAGGCTTCGGAATGGATGTTCTCCATCAT-GATTTGGAAGCCATAGAAA 53331 Query 130355 GAGCGCGCTTCGCTTATCTGTACCTCATCTGCAAAATTGTTATTGATATTCTCAAAAACA 130414 ||||||| ||| | || || |||| || ||| | | | ||||| ||| Sbjct 53332 CAGCGCGCCTCGGCAACTTGGACTTCATTTGAAAACCTCTCCAGAAGGTTCTCGTTGACA 53391 Query 130415 ATTCCATCGGACCCAGCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCG 130474 || ||||| || |||| || || || || | | | ||||| | | || || || Sbjct 53392 ATACCATCAGAGGCAGCGAAGAAAGCAAGAACGTGCGAGATGAAATGACGCTCGTTGTCA 53451 Query 130475 TTCA---GGGTCTTCCAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 || | || | ||||||||| | ||| || ||||| || | ||||||||||||||| Sbjct 53452 TTTAGACGGTTGGTCCAGTCGTGGATATCTTTGGAGAGGTCCATCTCCTCCGCAGTCCA 53510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618345179026200