Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq1364 178 4e-39 seq1235 168 2e-36 seq2477 152 2e-31 >seq1364 Length=53523 Score = 178 bits (196), Expect = 4e-39 Identities = 178/231 (77%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| |||||||| | | ||||| ||||| | ||||| || || ||||| ||||| || Sbjct 5391 CATTCCACCACGCAGGCGGAGAACGAGATGTAATGTAGATTCCTTCTGAATGTTATAGTC 5450 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||||| || || ||||| || ||||| |||||||| ||||| || |||||||| || || Sbjct 5451 AGATAGAGTGCGACCATCCTCCAGTTGCTTTCCAGCGAAGATGAGGCGTTGCTGGTCTGG 5510 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 ||||||||||| |||||||| || || || || ||||| || || | ||| |||| ||| Sbjct 5511 GGGAATTCCTTCCTTATCCTGGATCTTCGCCTTCACATTGTCTATAGTATCCGATGATTC 5570 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||||| || || | || || || || | ||||| ||||| |||||||| Sbjct 5571 AACTTCGAGGGTGATCGTTTTCCCAGTCAACGTTTTGACAAAGATCTGCAT 5621 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||||||||| || ||| |||||||| || || ||||| | || || ||||| || | Sbjct 5186 CAAGATGAAGGGTGCTCTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTCCA 5245 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 || || || || || || || || || |||||||||||||| || |||||||| || | Sbjct 5246 ACTGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTGGA 5305 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 |||| || || || || || || | ||| || | ||||| ||||| || | || || | Sbjct 5306 TTTTCGCCTTCACGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTTTCC 5365 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCATT 140738 ||||||| || || || |||||||||||| Sbjct 5366 CGGTTAGAGTCTTCACGAAAATCTGCATT 5394 Score = 114 bits (126), Expect = 4e-20 Identities = 101/126 (80%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||| ||||| || | | || ||||| || || ||||||||||| ||||| || ||||| Sbjct 5619 CATGCCACCGCGGAGACGGAGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAATC 5678 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 ||| || ||||| ||||| || || ||||||||||| ||||| |||||||| || ||||| Sbjct 5679 AGACAAGGTTCGACCATCCTCGAGCTGTTTTCCAGCGAAGATAAGACGTTGTTGGTCAGG 5738 Query 140627 AGGAAT 140632 ||||| Sbjct 5739 TGGAAT 5744 Score = 105 bits (116), Expect = 2e-17 Identities = 107/138 (78%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 140495 ACTAATATTTTACATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTG 140554 || ||||||| ||| ||||| || | | |||||||| || || || |||||||| || Sbjct 5890 ACGAATATTTG-CATCCCACCCCGAAGGCGAAGAACAAGGTGGAGGGTTGACTCTTTCTG 5948 Query 140555 AATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACG 140614 || |||||||| ||||| || || |||||||| ||||| || || ||||| || | ||| Sbjct 5949 TATGTTATAATCGGATAAAGTCCGACCATCTTCGAGTTGCTTCCCGGCAAAAATCAAACG 6008 Query 140615 TTGCTGATCAGGAGGAAT 140632 ||||||||| || || || Sbjct 6009 TTGCTGATCGGGTGGGAT 6026 Score = 84.2 bits (92), Expect = 7e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 140634 CCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCA 140693 ||||| || || || ||||| || || ||||||||||| | |||||| | ||| || ||| Sbjct 6081 CCTTCCTTGTCTTGGATTTTGGCCTTGACATTATCAATGGTATCAGAAGATTCGACCTCA 6140 Query 140694 AGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || | |||||||| || || || || ||||| |||||||| Sbjct 6141 AGGGTGATCGTCTTTCCAGTAAGGGTCTTCACAAAGATCTGCAT 6184 >seq1235 Length=84146 Score = 168 bits (186), Expect = 2e-36 Identities = 278/398 (70%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 349532 CCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTA 349591 ||||| |||||||| || ||| | | | ||||||||||||| ||||||| |||| | Sbjct 69421 CCCGAGGAAATTTCTTCCATGATCCTCCTCAAAATGAAGGAAACTGCTGAATCATACCTC 69480 Query 349592 GGTGAAAC---AGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAG 349648 || || | | |||| |||| ||| |||||||||||||||| || || ||| ||||| Sbjct 69481 GG--AACCTCCATTAACA-ATGCCGTTGTTACTGTACCAGCCTACTTCAACGATTCCCAG 69537 Query 349649 CGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAAT 349708 || || || || |||||||| | || | || | ||||| || | || || || Sbjct 69538 CGACAAGCCACTAAGGATGCTGGGACTATCTCTGGCATGAATGTGCTTCGTATCATCAAC 69597 Query 349709 GAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGTGACCAAGaaaaaaaT 349768 || ||||| || || || || || || || ||||| || | | || | ||| || Sbjct 69598 GAGCCCACGGCAGCCGCCATAGCCTACGGTCTTGACAAGAAGGTTGTCGGTGAACGCAAC 69657 Query 349769 ATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAG 349828 | || || |||||| | ||||| || || || || || || || | || | || || Sbjct 69658 GTCCTCATCTTTGATCTCGGTGGAGGAACCTTCGACGTGTCTCTCTTGACCATCGAGGAA 69717 Query 349829 GGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGAT 349888 || || |||||||| ||||| ||||||||||| || ||||| || || || ||||| || Sbjct 69718 GGTATCTTTGAAGTCAAAGCCACTGCTGGTGACACTCATCTGGGAGGCGAGGATTTCGAC 69777 Query 349889 AATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCG 349926 || | ||||| || || ||| | || || ||||| Sbjct 69778 AACAGACTCGTCAACCACTTCGTTCAGGAGTTCAAGCG 69815 Score = 100 bits (110), Expect = 9e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 349231 TTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAG 349290 |||||||| ||||||||||||||||||||| || || || || || || || |||||| | Sbjct 69018 TTGTGTTGGTGTTTGGCAAAATGATCGTGTTGAGATCATCGCCAACGACCAGGGTAACCG 69077 Query 349291 AACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATTGGTGATTCTGCAAA 349350 ||| || || || || || | || |||| | ||||||| | || || ||| | ||||| Sbjct 69078 AACTACCCCTTCTTATGTCTCCTTCTCCGACAGTGAGCGTCTTATCGGCGATGCCGCAAA 69137 Query 349351 AAATCAAG 349358 ||| |||| Sbjct 69138 AAACCAAG 69145 Score = 100 bits (110), Expect = 9e-16 Identities = 256/386 (66%), Gaps = 8/386 (2%) Strand=Plus/Plus Query 349951 TAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATC 350010 ||||||| | || | || ||||| | || || || || ||||| || || | | || Sbjct 69895 TAATCCTCGTGCCGTCCGCCGCCTCCGCACCGCTTGCGAGCGTGCCAAACGCACTCTCTC 69954 Query 350011 ATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTC 350070 || |||| |||||||| |||||||| || |||||| || |||| || |||| | | Sbjct 69955 TTCCGCTACTCAAACCTCCATTGAAATCGACTCTCTTTTCGAAGGCATTGACTTCTATAC 70014 Query 350071 ATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGA 350130 | | | || |||||||| || || |||||||| ||| || || | | || | || Sbjct 70015 AGCCCTCACTCGTGCTCGATTCGAGGAATTATGCCAGGACCTCTTCCGTGGGACTCTCGA 70074 Query 350131 TCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGT 350190 || || || || || | ||||| || || |||| | | | |||| | || Sbjct 70075 GCCCGTTGAGAAGGTTCTCCGGGATGCCAAGATTGACAAAGCTAACGTCCATGAGATCGT 70134 Query 350191 TTTAGTTGGTGGTTCTACACGTATTCCA---AAAGTTCAACAGTTACTATCTGAGTTTTT 350247 | | ||||| ||||| || |||||||| | ||| | | | | || || || || Sbjct 70135 TCTTGTTGGAGGTTCCACCCGTATTCCTCGTATCGTTAAGC---TCGTGTCAGATTTCTT 70191 Query 350248 TAATGGCAAAGAACCTTCTA-GATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTG 350306 || ||||| || || || || || | || || ||||| || || ||||| ||||||| Sbjct 70192 CAACGGCAAGGAGCCCAATAAGAGCA-TCAACCCCGATGAGGCCGTCGCATACGGTGCTG 70250 Query 350307 CTGTTCAGGCATCTATTTTATCTGGA 350332 |||| || || | ||| | || ||| Sbjct 70251 CTGTCCAAGCTGCCATTCTGTCGGGA 70276 >seq2477 Length=31422 Score = 152 bits (168), Expect = 2e-31 Identities = 158/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591 ||||| || |||||||| || ||||| || || ||||| | || ||||| || || ||| Sbjct 18907 AGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGT 18848 Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651 ||||| ||||| ||||| | ||||||||| ||||| || || |||||||| || || || Sbjct 18847 TGTTTCCCAGCGAAGATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATC 18788 Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711 || || || ||||||||||||| ||||| | ||||| || | || | ||||| || Sbjct 18787 TTGGCCTTCACATTATCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCC 18728 Query 140712 GTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || || || ||||||||| Sbjct 18727 GTGAGGGTCTTGACGAAGATCTGCATT 18701 Score = 141 bits (156), Expect = 3e-28 Identities = 170/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566 ||||||||| || | | || || |||||||| || ||||| || || || || ||||| Sbjct 19493 CATACCACCCCGAAGACGGAGGACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAATC 19434 Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626 || | || ||||||||||| || || || || ||||| || | || ||||| || || Sbjct 19433 CGAGAGGGTCCGCCCATCTTCGAGCTGCTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGG 19374 Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686 |||||||||||| || || || || ||||| || || || || |||| || || | || Sbjct 19373 AGGAATTCCTTCCTTGTCTTGGATCTTAGCCTTGACGTTGTCGATCGTGTCGGAAGACTC 19314 Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || | ||||| ||||| || || || ||||| |||||||| Sbjct 19313 GACCTCCAGAGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 19263 Score = 123 bits (136), Expect = 8e-23 Identities = 151/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 140532 AGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGT 140591 ||||| || || ||||| || ||||| |||||||| || | || || || || || || Sbjct 19191 AGATGGAGTGTCGACTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGAGC 19132 Query 140592 TGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATT 140651 || || ||||||||||| | ||| ||||| || || ||||| || || || ||||| || Sbjct 19131 TGCTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATC 19072 Query 140652 TTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCG 140711 ||||| || ||||| || || | || || | || ||||| | |||| |||||||| Sbjct 19071 TTAGCCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTCCC 19012 Query 140712 GTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || || ||||| Sbjct 19011 GTCAGGGTCTTGACGAAGATTTGCAT 18986 Score = 114 bits (126), Expect = 4e-20 Identities = 151/208 (73%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 140530 CAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAA 140589 |||| |||||||| |||||| || || || || || || | || || ||||| || | Sbjct 19697 CAAG-TGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGA 19639 Query 140590 GTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAA 140649 | || || ||||||||||| ||||| || || || || || || || || || ||||||| Sbjct 19638 GCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 19579 Query 140650 TTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTC 140709 | || || || || || || |||| ||||| | || || || || || | ||||| | Sbjct 19578 TCTTCGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCC 19519 Query 140710 CGGTTAGTGTTTTTACAAAAATCTGCAT 140737 |||| || || || || || |||||||| Sbjct 19518 CGGTGAGGGTCTTGACGAATATCTGCAT 19491 Score = 95.1 bits (104), Expect = 4e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || |||||||| ||||| || |||||||| |||||||| | || |||||||| Sbjct 18685 AGGACGAGGTGAAGAGTCGACTCCTTCTGAATATTGTAATCAGAAAGGGTGCGCCCATCC 18626 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAAT 140632 || || || || ||||| ||||| | ||| ||||||||||| || || Sbjct 18625 TCGAGCTGCTTCCCAGCGAAGATCAAACGCTGCTGATCAGGGGGGAT 18579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515028321675935