Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq168 114 1e-20 seq5512 82.4 8e-11 >seq168 Length=158170 Score = 114 bits (126), Expect = 1e-20 Identities = 331/497 (67%), Gaps = 18/497 (4%) Strand=Plus/Minus Query 59613 TCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACCTGAAGGATTGGGACAAGC-- 59670 || |||||| | | |||||||| |||||| || ||| | | || ||| ||| | Sbjct 53516 TCTTTCTGGACTGCGGAGGAGATGGACCTCTCCAAAGATATCCACGACTGGACCAACCGT 53457 Query 59671 -TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCTTCTTCGCGGCGAGTGAT 59729 | ||| || |||||| ||||||||| | || || || |||||||| || |||| Sbjct 53456 CTAAATGACAACGAGCGTCATTTCATCTCGCACGTTCTTGCTTTCTTCGCTGCCTCTGAT 53397 Query 59730 GGAATTGTGATGGAAAA---TATAGACATGAACTTTTCCAAGGATGTCCAGATTGCCGAG 59786 || ||||| | || || | | || | | ||||| || || ||||| |||||||| Sbjct 53396 GGTATTGTCAACGAGAACCTTCTGGAGAGG---TTTTCAAATGAAGTCCAAGTTGCCGAG 53340 Query 59787 GCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTATCCACTCCGAGACGTACTCG 59846 || || | ||||| | | || | | ||| ||||| ||||| | || ||| Sbjct 53339 GCGCGCTGTTTCTATGGCTTCCAAATCATGATGGAGAACATCCATTCCGAAGCCTATTCG 53280 Query 59847 CTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGTCTGTTCCGTGCCATA 59906 || | ||||| | | |||||||| | || | ||| || |||||| Sbjct 53279 CTTCTCATCGACACTTATATCAAGGATGCTACTCAGCGTGAATATCTCTTTGATGCCATC 53220 Query 59907 GAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAGTGGATG--AGTCCT 59963 |||||| | || ||| | || | || |||||||||||| | ||||||| || Sbjct 53219 GAGACGATTCCTTGCA-TCAAGCGCAAGGCAGAATGGGCCCTTGAGTGGATTTCAGATAA 53161 Query 59964 GGAG-CATCATTTGCACAACGTCTCATAGCTTTTGCATGC-GTGGAAGGAATCTTCTTCT 60021 | | || |||||| |||| ||| | || || || ||| || || || || ||||||| Sbjct 53160 GAAATCAACATTTGGCGAACGCCTCGTTGCGTTCGC-TGCTGTAGAGGGTATTTTCTTCT 53102 Query 60022 CTGGCTCGTTCTGTG-CTATTTTCTGGCTCAAAAAGCGTGGCCTCATGCCGGGCCTGAGT 60080 |||| ||||| || | | || |||||| | || ||||||||| | ||||| || || | | Sbjct 53101 CTGGATCGTT-TGCGTCAATCTTCTGGATGAAGAAGCGTGGCTTGATGCCTGGACTTACT 53043 Query 60081 TTCTCCAACGAGCTGAT 60097 || |||||||| || || Sbjct 53042 TTTTCCAACGAACTTAT 53026 >seq5512 Length=8717 Score = 82.4 bits (90), Expect = 8e-11 Identities = 145/209 (69%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 19410 CCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTACGTCAACCAGG 19469 || ||||||| || || ||||| |||| | | | || || | ||||| |||||| Sbjct 5572 CCAACGGTATTGTGCCGATGCTGCGCGCGTACGATGCTACTGCTCGTTACGTTGACCAGG 5631 Query 19470 GGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCA 19529 | ||| || || || |||||||||||||| |||| || ||||| || || || Sbjct 5632 GAGGCAATAAGCGGCCTGGAGCGTTCGCCATCTACATCGAACCTTGGCATGCTGATGTTC 5691 Query 19530 TGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTGTC-GCGACCTC 19588 | ||||||||||| ||||| ||| || || | || ||| || || | | || ||| Sbjct 5692 TTGATTTCCTCGACCTGCGAAAGAATCATGGCAAGGAAGAGTCTCG-TGCCAGGGATCTC 5750 Query 19589 TTCACGGCCTTGTGGATTCCGGACCTATT 19617 ||| || |||||||| || ||||| || Sbjct 5751 TTCTACGCTTTGTGGATCCCTGACCTTTT 5779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548444955358800