Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq2477 185 1e-41 seq1364 163 3e-35 seq5512 129 7e-25 seq1314 96.9 4e-15 seq332 95.1 1e-14 seq331 87.8 2e-12 seq168 86.0 7e-12 >seq2477 Length=31422 Score = 185 bits (204), Expect = 1e-41 Identities = 177/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || ||||||||||| || ||||| ||||| ||||| Sbjct 19263 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCATCACTCTGGAGGTCGAGTCTTCC 19322 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | |||||||| || || |||||||| ||||||||||| |||||| Sbjct 19323 GACACGATCGACAACGTCAAGGCTAAGATCCAAGACAAGGAAGGAATTCCTCCCGACCAG 19382 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 ||||| | |||||||| || ||||| ||||| |||| || ||||| | || || || Sbjct 19383 CAGCGCTTGATTTTTGCCGGGAAGCAGCTCGAAGATGGGCGGACCCTCTCGGATTACAAC 19442 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||| || || |||||||| ||| | |||||||| ||||| Sbjct 19443 ATCCAGAAGGAGTCGACACTTCATCTCGTCCTCCGTCTTCGGGGTGG 19489 Score = 159 bits (176), Expect = 4e-34 Identities = 159/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| |||||||| || || || ||||| ||||| | || || ||||| Sbjct 18986 ATGCAAATCTTCGTCAAGACCCTGACGGGAAAGACCATTACCTTGGAAGTCGAGTCTTCA 19045 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||| | ||| | |||||||| || |||||||||||||| ||||| || |||||| Sbjct 19046 GACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 19105 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||| | || |||||||| ||||| |||||||| | |||||| || | || ||||| Sbjct 19106 CAGCGTTTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGTACTCTTTCGGATTATAAC 19165 Query 27586 GTCCAAAAGGAATCCACTCTTCATCT 27611 | || ||||| || || || ||||| Sbjct 19166 ATTCAGAAGGAGTCGACACTCCATCT 19191 Score = 154 bits (170), Expect = 2e-32 Identities = 156/203 (77%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || |||||||| || ||||| ||||| || || || ||||| ||||| | Sbjct 19491 ATGCAGATATTCGTCAAGACCCTCACCGGGAAGACCATCACCCTGGAGGTCGAGTCGTCT 19550 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || | ||||| || ||||||||||||||||| || || || ||||| Sbjct 19551 GACACGATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAA 19610 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| ||||| |||||||||| ||| ||||| | ||||| || Sbjct 19611 CAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTCGCACCCTCTCGGACTACAAC 19670 Query 27586 GTCCAAAAGGAATCCACTCTTCA 27608 |||| || || ||||||||| Sbjct 19671 ATCCAGAAAGAGAGCACTCTTCA 19693 Score = 149 bits (164), Expect = 7e-31 Identities = 157/207 (76%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| ||||| |||||||| || || |||||||| || ||| | ||||||||||| Sbjct 18701 AATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTTGAGTCCTC 18760 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||| | |||| ||| ||||||| || || || ||||| || || || || || ||||| Sbjct 18761 TGACACGATTGATAATGTGAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCA 18820 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||| ||| | || || ||||| || ||||||||||| | |||||||| | ||||| || Sbjct 18821 GCAACGTTTGATCTTCGCTGGGAAACAACTCGAGGACGGGCGTACCCTCTCTGACTACAA 18880 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCT 27611 | || ||||| || || || ||||| Sbjct 18881 CATTCAGAAGGAGTCTACCCTCCATCT 18907 >seq1364 Length=53523 Score = 163 bits (180), Expect = 3e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| ||| | || || || || || || || || ||||| ||| Sbjct 5621 ATGCAGATCTTTGTCAAAACGTTGACTGGGAAAACGATCACCCTCGAAGTTGAATCATCG 5562 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| || | ||| ||||||| || || ||||| ||||| |||||||| ||||||||| Sbjct 5561 GATACTATAGACAATGTGAAGGCGAAGATCCAGGATAAGGAAGGAATTCCCCCAGACCAG 5502 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 || || || || || ||||| |||||||| ||||||| ||| || ||| | |||||||| Sbjct 5501 CAACGCCTCATCTTCGCTGGAAAGCAACTGGAGGATGGTCGCACTCTATCTGACTATAAC 5442 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGGA 27633 | || |||||||| || | ||||| || | || || || |||||| Sbjct 5441 ATTCAGAAGGAATCTACATTACATCTCGTTCTCCGCCTGCGTGGTGGA 5394 Score = 134 bits (148), Expect = 2e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || || ||||| || ||||| || || || || |||||||||||||| Sbjct 5394 AATGCAGATTTTCGTGAAGACTCTAACCGGGAAAACCATCACCCTTGAGGTTGAGTCTTC 5335 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 |||| ||| | || ||||||| ||||| || || || ||||| |||||||| || || Sbjct 5334 CGATACCATCGACAACGTGAAGGCGAAAATCCAAGATAAAGAGGGGATTCCTCCTGATCA 5275 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 ||||| || || || || || ||||| | ||||||| ||||| || | ||||| || Sbjct 5274 ACAGCGCCTGATATTCGCGGGGAAGCAGTTGGAGGATGGACGTACTCTTTCTGACTACAA 5215 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCT 27611 | |||||||| ||| |||||||| Sbjct 5214 CATTCAAAAGGAGAGCACCCTTCATCT 5188 >seq5512 Length=8717 Score = 129 bits (142), Expect = 7e-25 Identities = 213/303 (70%), Gaps = 6/303 (2%) Strand=Plus/Minus Query 80715 CATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGA 80774 |||||| ||| || || || || || || | |||| |||||||| ||| ||||||| Sbjct 6400 CATGAAAGTGTCGGCGAGACCTTGTACACCAACACCGATGGGGCGGTGACGCATGTTCGA 6341 Query 80775 TCGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGT 80834 ||| || || || || |||||| |||| ||||||| ||| || |||||| | Sbjct 6340 TCGGCGAGCTTCGGGGATAGGGTAATAGTTGACGTCGATGATGCGATTGAGGTTGTAGGC 6281 Query 80835 AACAACCCGTGTAACATCATGAAGTTTCTGAAAGTCGAATTGGTTCCCCT--TCACAAAT 80892 ||||||| || ||||||||||||||||| || ||| | | | || | | | || Sbjct 6280 AACAACCTTGGTGACATCATGAAGTTTCTGGAAATCGTACT--TGCCATTTGTGATGAAG 6223 Query 80893 GCCGGAAG-GCTCAGGGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTC 80951 | ||||| ||| | || ||||| || || || ||| ||| |||| | | | | || Sbjct 6222 GTGGGAAGAGCT-AAAGAAGCCAGGTTACAGACAGCCGTCTCATCAGGAGAGGAATATTC 6164 Query 80952 GACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTT 81011 || |||||| ||||| | || || || || || || || ||||||| |||||| ||||| Sbjct 6163 GATGATTTCAGTGCAGAGGTTGGACGATTTGATGGTCCCGAGGTTTTGCTGGTTCGACTT 6104 Query 81012 GGC 81014 ||| Sbjct 6103 GGC 6101 >seq1314 Length=22516 Score = 96.9 bits (106), Expect = 4e-15 Identities = 154/221 (70%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 24723 TTTTATCAGGCGGGTACGAGTGAGATGTTTGGCAAGGTGCAGGAGACGCCACAGTCGGAG 24782 || ||||||||| || ||| ||| |||||||||| |||||| || ||| || Sbjct 11249 TTCTATCAGGCGTCGACATCGGAGCTGTATGGCAAGGTGGTGGAGACCCCCCAGAGCGAA 11308 Query 24783 ACCACTCCATTTTATCCGCGAAGCCCGTATGGGGTCTCAAAGGTGTTCGCGTACTGGATA 24842 || || ||||| ||||| ||| ||| ||||| ||||| | | |||||||||||| Sbjct 11309 ACGACACCATTCTATCCCCGATCCCCTTATGGCTGTGCAAAGCTCTACGCGTACTGGATC 11368 Query 24843 ACCAAGAACTACCGTGAGGCCCATGGGATATATGCATGCAACGGAATTCTGTTCAACCAT 24902 | |||||||||||||| | || || | || ||||| || || |||||||| || Sbjct 11369 GTCGTCAACTACCGTGAGGCATACGGAATGTTCGCGTGCAATGGTATCCTGTTCAATCAC 11428 Query 24903 GAGTCGGAGCGTCGGGGACCTGAATTTGTTACACGAAAGAT 24943 ||| ||||| ||| ||| || || |||||||| Sbjct 11429 GAGAGTCCTCGTCGCGGAAGGACATTCGTGACGCGAAAGAT 11469 >seq332 Length=22363 Score = 95.1 bits (104), Expect = 1e-14 Identities = 99/130 (76%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 64738 GTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGC 64797 || || |||||||| ||||| ||| || || ||||| ||| | || || || || Sbjct 2058 GTCGAGGGAATTTTTTTTTCATCGTCCTTTGCATCAATTTTTTGGTTGAAGAAACGAGGA 1999 Query 64798 CTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAA 64857 ||||||||||| | | |||||||||||||| |||||||||||||| || || ||| Sbjct 1998 CTGATGCCAGGATTATGTTTTTCGAACGAGCTTATCTCTCGGGACGAAGGACTTCACACC 1939 Query 64858 GAATTTGCGG 64867 |||||||||| Sbjct 1938 GAATTTGCGG 1929 >seq331 Length=21972 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 64738 GTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAAAAAGCGGGGC 64797 || || || ||||| ||||| || ||| ||||| || ||| | ||||| || || Sbjct 15631 GTTGAGGGGATTTTTTTTTCATCATCCTTCGCATCTATATTTTGGTTGAAAAAACGAGGA 15690 Query 64798 CTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGGGCTCCACCAA 64857 |||||||||| | | ||||||||||| || ||||| |||||||| ||||| ||| | Sbjct 15691 TTGATGCCAGGATTATGCTTTTCGAACGAACTTATCTCCCGGGACGAAGGGCTTCACACA 15750 Query 64858 GAATTTGC 64865 |||||||| Sbjct 15751 GAATTTGC 15758 >seq168 Length=158170 Score = 86.0 bits (94), Expect = 7e-12 Identities = 131/185 (71%), Gaps = 4/185 (2%) Strand=Plus/Minus Query 64708 TTTGGTCAGCGTCTCGCAGCTTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTC 64767 ||||| | || |||| || || || ||| || || |||||||| ||||| || || Sbjct 53150 TTTGGCGAACGCCTCGTTGCGTTCGCTGCTGTAGAGGGTATTTTCTTCTCTGGATCGTTT 53091 Query 64768 TGTTCTATTTTCTGGCTAAAAAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAG 64827 || || |||||| | || ||||| ||| ||||||| || || | ||||| ||||| Sbjct 53090 GCGTCAATCTTCTGGATGAAGAAGCGTGGCTTGATGCCTGGACTTACTTTTTCCAACGAA 53031 Query 64828 CTGATCTCTCGGGACGAGGGGCTCCACCAAGAATTTGCGG--TTACCCTGTTCAGCCACC 64885 || ||| ||| || || || | ||| || |||||| |||| || ||||||||| Sbjct 53030 CTTATCAGTCGTGATGAAGGCATGCACACCGATTTTGCGTGCTTACTCT--TCAGCCACC 52973 Query 64886 TCAAG 64890 ||||| Sbjct 52972 TCAAG 52968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570227384192400