Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq6557 141 8e-29 seq1875 123 2e-23 >seq6557 Length=2833 Score = 141 bits (156), Expect = 8e-29 Identities = 220/305 (72%), Gaps = 12/305 (4%) Strand=Plus/Minus Query 30116 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT---GAGG 30172 ||||||||||| |||| || ||||||||||| || || | | |||||| | || Sbjct 1298 TTGGGGTTCCACGCGCTCAGGATGATGCGCCGATCCGTCGGATCCTCCCTGATCTTGCGG 1239 Query 30173 -TCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGA-GTAGTCT-GCCCTCATGTCC 30229 | ||| || ||||||| ||||||||| |||||| ||| || || | || ||| Sbjct 1238 ATGCACT-CGC---GCAGCTGGTCCACCCCC-TCCCCGCTGTAATCCCGCTCGCAA-TCC 1185 Query 30230 GTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT 30289 ||||| || |||||||| | ||||||||||||||||||||| |||||||| ||| | Sbjct 1184 ACATACTCCGCGCCGAAATGGCGCCACTGGAACCCGTACACCGGCCCCAGGTCGCCCGCC 1125 Query 30290 TCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 30349 ||||||| | | ||||||| || | || | | || |||||| ||||||||||| Sbjct 1124 CTCCTGTGCCCCAGGCCCCTCCCCTCGAGGAACGCCTTCGACCCGTTGCCGTCCCAGATC 1065 Query 30350 TTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGC 30409 || || ||| || | ||||| || || || || || | |||||||| |||||| Sbjct 1064 TTCACGCCCCTCGCGGAGAGGAGGGCGGCGTCCGTCGAGCCGCGCACGAACCAGAGCAGC 1005 Query 30410 TCCTC 30414 ||||| Sbjct 1004 TCCTC 1000 >seq1875 Length=13504 Score = 123 bits (136), Expect = 2e-23 Identities = 167/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 30186 GCAGCTGATCCACCCCCATCCCCGAGTAGTCT-GCCCTCATGTCCGTGTACTCTGCTCCG 30244 ||||||| ||||||||| |||| || || || | || ||| ||||| || || Sbjct 12296 GCAGCTGGTCCACCCCCTCCCCCCCATAATCCCGCTCGCAA-TCCACATACTCCGCGCCA 12354 Query 30245 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30304 ||||| | |||||||||||| |||||||| |||| || ||||| ||| ||| | | | Sbjct 12355 AAATGGCGCCACTGGAACCCATACACCGGGCCCAAATCGCCCTCGCGCCTATGCCCCAGG 12414 Query 30305 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCA 30364 |||| | || | || | | || |||||| ||||||||||||| || |||||| | Sbjct 12415 CCCCGCGCCTCGAGGAACGCCTTCGACCCGTTGCCGTCCCAGATCTTCACGCCCTTCGCC 12474 Query 30365 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30414 || || | |||||| || || || | |||||||||||||||||||| Sbjct 12475 GACAGAAGTGTGGAGTCCGTCGAGCCGCGCACGAACCACAGCAGCTCCTC 12524 Score = 82.4 bits (90), Expect = 6e-11 Identities = 111/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 29895 GGTAGACGTGAGCGTCTCCCAGGTTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGT 29954 |||| ||||| ||||| || || | | ||| | ||| | | || || ||||||| Sbjct 11914 GGTACACGTGCGCGTCGCCGAGCTGGATGACGAGCTCCGCGGCCTCGGTGCCCGTGACGT 11973 Query 29955 GAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCA 30014 | || | ||||| |||||| || | ||| |||||||| || || | ||||||||||| Sbjct 11974 GCGCGAGCATGTGCGTGAGCAGCGCGTACGACGCGATGTTGAACGGGATCCCGAGCCCCA 12033 Query 30015 TGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGC 30049 |||| | || | |||||| | | | ||||||||| Sbjct 12034 GGTCCGCGGAGCGCTGGTACATCAGGCACGAGAGC 12068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406252735031340