Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq2477 100 2e-16 seq1364 95.1 8e-15 >seq2477 Length=31422 Score = 100 bits (110), Expect = 2e-16 Identities = 149/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 34499 CCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAA 34558 ||| |||||| || |||||| |||||||||||||| ||||| || || |||| || | Sbjct 19193 CCAGATGGAGTGTCGACTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGA 19134 Query 34559 GTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGA 34618 | || || || ||||| || |||||||| ||||| || || | ||||||||||| || Sbjct 19133 GCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGA 19074 Query 34619 TCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677 || || | || || | || |||||| ||| ||||||| ||| || || || Sbjct 19073 TC-TTAGCCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTT 19015 Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || | || || || || || ||||| Sbjct 19014 CCCGTCAGGGTCTTGACGAAGATTTGCAT 18986 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 34499 CCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCAA 34558 |||| || ||||||||||| || || ||||| || || || || || || | || || | Sbjct 19698 CCAAGTGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGA 19639 Query 34559 GTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTGA 34618 | || || || ||||| || | |||||||||||| || || | ||||||||||| ||| Sbjct 19638 GCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTC-CTGA 19580 Query 34619 TCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTTA 34677 || | || ||| | || ||||| ||| || |||| ||| || || || Sbjct 19579 ATCTTCGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTC 19520 Query 34678 CCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||| | || || || || |||||||| Sbjct 19519 CCGGTGAGGGTCTTGACGAATATCTGCAT 19491 >seq1364 Length=53523 Score = 95.1 bits (104), Expect = 8e-15 Identities = 150/211 (71%), Gaps = 3/211 (1%) Strand=Plus/Plus Query 34498 ACCAA-ATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTC 34556 ||||| ||| || |||||||||||||||||||| || || ||||| || || | || || Sbjct 5184 ACCAAGATGAAGGGTGCTCTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTC 5243 Query 34557 AAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGT 34616 | || || || || ||||| | |||||||| || || || | ||||| || ||| Sbjct 5244 CAACTGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTG 5303 Query 34617 GATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTT 34675 ||| ||| | || ||| | || || || ||| || || | ||| || |||| Sbjct 5304 GAT-TTTCGCCTTCACGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTT 5362 Query 34676 TACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 | ||||||| || ||||| ||||||||||| Sbjct 5363 TCCCGGTTAGAGTCTTCACGAAAATCTGCAT 5393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314684932493285