Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2477 140 3e-28 seq1364 105 6e-18 >seq2477 Length=31422 Score = 140 bits (154), Expect = 3e-28 Identities = 169/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| ||||| || ||||| ||||||||| | || ||||| || || || | ||| Sbjct 19263 ATGCAGATCTTTGTCAAGACTCTCACCGGCAAGACCATCACTCTGGAGGTCGAGTCTTCC 19322 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || || |||||||| ||||| || || ||||| || Sbjct 19323 GACACGATCGACAACGTCAAGGCTAAGATCCAAGACAAGGAAGGAATTCCTCCCGACCAG 19382 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | ||||| || || | ||||| | |||| | || ||||||||| Sbjct 19383 CAGCGCTTGATTTTTGCCGGGAAGCAGCTCGAAGATGGGCGGACCCTCTCGGATTACAAC 19442 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || ||||||||||| | ||| | || | ||| | |||||||| || Sbjct 19443 ATCCAGAAGGAGTCGACACTTCATCTCGTCCTCCGTCTTCGGGGTGGTAT 19492 Score = 116 bits (128), Expect = 3e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || |||||| | || ||| | || || || | || Sbjct 18702 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTTGAGTCCTCT 18761 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| ||||||| | || || || || ||||||||||||||||| || || || || Sbjct 18762 GACACGATTGATAATGTGAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCAG 18821 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 || ||||| || | ||| || |||||| | || ||| | ||| | || || |||||| Sbjct 18822 CAACGTTTGATCTTCGCTGGGAAACAACTCGAGGACGGGCGTACCCTCTCTGACTACAAC 18881 Query 27168 ATTCAAAAGGAGTCGACCTTACAT 27191 ||||| |||||||| ||| | ||| Sbjct 18882 ATTCAGAAGGAGTCTACCCTCCAT 18905 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || || ||||| || ||| | ||||| | ||||| || | || Sbjct 18986 ATGCAAATCTTCGTCAAGACCCTGACGGGAAAGACCATTACCTTGGAAGTCGAGTCTTCA 19045 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || || || ||||| || || || || ||||| || Sbjct 19046 GACACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAG 19105 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||||| || | || ||||| || | || ||| || || |||| ||||| ||| Sbjct 19106 CAGCGTTTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGTACTCTTTCGGATTATAAC 19165 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGG 27195 ||||| ||||||||||| | ||| ||| Sbjct 19166 ATTCAGAAGGAGTCGACACTCCATCTGG 19193 Score = 98.7 bits (108), Expect = 9e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||||||||| || || || || ||||| ||| | || || || || || || |||| Sbjct 19491 ATGCAGATATTCGTCAAGACCCTCACCGGGAAGACCATCACCCTGGAGGTCGAGTCGTCT 19550 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| |||| || | ||||| || ||||| ||||| || ||||| || ||||| ||| Sbjct 19551 GACACGATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAA 19610 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | || ||||| || | || || || ||| | || || |||||| Sbjct 19611 CAGCGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTCGCACCCTCTCGGACTACAAC 19670 Query 27168 ATTCAAAAGGAG 27179 || || || ||| Sbjct 19671 ATCCAGAAAGAG 19682 >seq1364 Length=53523 Score = 105 bits (116), Expect = 6e-18 Identities = 150/210 (71%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||||| ||||| || | || || ||||| || || | ||| Sbjct 5393 ATGCAGATTTTCGTGAAGACTCTAACCGGGAAAACCATCACCCTTGAGGTTGAGTCTTCC 5334 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | || || ||||| ||||| ||||| || || || || |||||| Sbjct 5333 GATACCATCGACAACGTGAAGGCGAAAATCCAAGATAAAGAGGGGATTCCTCCTGATCAA 5274 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | |||| ||| || || || ||||| || | || |||| || |||||| Sbjct 5273 CAGCGCCTGATATTCGCGGGGAAGCAGTTGGAGGATGGACGTACTCTTTCTGACTACAAC 5214 Query 27168 ATTCAAAAGGAGTCGACCTTACAT-TTGGT 27196 |||||||||||| ||| | ||| ||||| Sbjct 5213 ATTCAAAAGGAGAGCACCCTTCATCTTGGT 5184 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434855092190400