Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2477 100 2e-16 >seq2477 Length=31422 Score = 100 bits (110), Expect = 2e-16 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 39077 CCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAA 39136 ||| ||| || || ||| || || || |||||||| | ||| || || |||| || | Sbjct 19193 CCAGATGGAGTGTCGACTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGA 19134 Query 39137 GCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGA 39196 |||| ||||| ||||| || | |||||||||||||| ||| | | ||| |||||| || Sbjct 19133 GCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGA 19074 Query 39197 TTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTC 39256 | || |||| | | | || || ||||| || |||| || || | |||| Sbjct 19073 TCTTAGCCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTC 19014 Query 39257 CCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||||||| || || || ||||||||||| Sbjct 19013 CCGTCAGGGTCTTGACGAAGATTTGCAT 18986 Score = 100 bits (110), Expect = 2e-16 Identities = 149/209 (71%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 39077 CCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAA 39136 |||| || || ||||||||||| || || || || || | || || || | || || | Sbjct 19698 CCAAGTGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGA 19639 Query 39137 GCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGA 39196 |||| ||||| ||||| || |||||||| ||||||| ||| | || ||| |||||| | Sbjct 19638 GCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 19579 Query 39197 TTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTT 39255 | ||| |||| ||| | | | ||| || |||||| || |||| ||||| | || Sbjct 19578 TCTTCGCCTTGA-CGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTC 19520 Query 39256 CCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || || || || || || || ||||| Sbjct 19519 CCGGTGAGGGTCTTGACGAATATCTGCAT 19491 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429484637411885