Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq2477 129 1e-24 seq57 116 9e-21 seq1364 113 1e-19 seq8065 84.2 5e-11 seq786 84.2 5e-11 >seq2477 Length=31422 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 || ||||| || || || || || | || ||||| | | ||| | || || || ||| Sbjct 19191 AGATGGAGTGTCGACTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGAGC 19132 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 ||||| ||||| ||||| | || || |||||||| |||||||| |||||||| |||||| Sbjct 19131 TGCTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATC 19072 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || ||| ||| |||||||||||||| | || || || || || || ||||| ||| Sbjct 19071 TTAGCCTTGACATTGTCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTCCC 19012 Query 225688 GTCAAAGTTTTTATGAACACTTGCAT 225713 |||| || || | ||| | |||||| Sbjct 19011 GTCAGGGTCTTGACGAAGATTTGCAT 18986 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||| || || || || || || || |||| |||||||| | | || Sbjct 19483 CGAAGACGGAGGACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTC 19424 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||||||| ||||||||||| || || || | || || |||||||| ||||| ||| Sbjct 19423 CGCCCATCTTCGAGCTGCTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGGAGGAATTCCT 19364 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 ||||||||||||||||| ||| || ||||| ||||| || | || || || | Sbjct 19363 TCCTTGTCTTGGATCTTAGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCCAGA 19304 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| |||||||| || | ||| || Sbjct 19303 GTGATGGTCTTGCCGGTGAGAGTCTT 19278 Score = 122 bits (134), Expect = 2e-22 Identities = 151/207 (73%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 225508 AGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGC 225567 || ||||| || || || || || | ||||| || | | || | ||| || || || Sbjct 18907 AGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGT 18848 Query 225568 TGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATC 225627 || |||||||||||||| | ||||| ||||| || || || ||||| |||||||||||| Sbjct 18847 TGTTTCCCAGCGAAGATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATC 18788 Query 225628 TTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCC 225687 || ||||||| || || ||||| |||| || || || || ||||| ||||||||| Sbjct 18787 TTGGCCTTCACATTATCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCC 18728 Query 225688 GTCAAAGTTTTTATGAACACTTGCATT 225714 || | || || | ||| | |||||| Sbjct 18727 GTGAGGGTCTTGACGAAGATCTGCATT 18701 Score = 102 bits (112), Expect = 2e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 225510 GTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTG 225569 ||| |||||| ||||| |||| ||||| || | | || | ||||| || ||||| Sbjct 19694 GTGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGAGCTG 19635 Query 225570 CTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTT 225629 ||| ||||| ||||| || || ||||||||||| || || || |||||||| || ||||| Sbjct 19634 CTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTT 19575 Query 225630 TTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| || ||||| ||||| || | || || || | ||||| ||||| || || Sbjct 19574 CGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCCCGGT 19515 Query 225690 CAAAGTTTTTATGAACACTTGCAT 225713 | || || | ||| | ||||| Sbjct 19514 GAGGGTCTTGACGAATATCTGCAT 19491 >seq57 Length=43721 Score = 116 bits (128), Expect = 9e-21 Identities = 85/99 (86%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| || ||||| || |||||||| |||||||| || |||||||| ||||| |||| Sbjct 33584 TTCAGGGTGTCCAAAGAACCAGAATAAGTGTTGATATAGTATAGGATCACCTCCTCCTGC 33525 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA 370770 ||||||| | |||||||||||||| |||||||| ||||| Sbjct 33524 TGGATCATAGAAGCTAGTATTAAAGTTTCTATCTGTTAA 33486 Score = 102 bits (112), Expect = 2e-16 Identities = 130/179 (73%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424 |||||||||||||| | || | |||| ||||||||| ||| | ||| | || || Sbjct 33406 AATGGTAATTTATGTAATGACATACCATTAGTTCTCATATTTAATGTTGTACTTATGAAA 33347 Query 371425 TTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCG 371484 || ||||| |||| | |||||||| || ||||| |||||||| || || |||||||| Sbjct 33346 TTAATAGCTCCTAATAAAGAAGATACCCCAGCAAGGTGTAAACTGAAGATAGCTAAATCT 33287 Query 371485 ACGGAACCGCCGGAGTGAGCTACAATAGAACTTAACGGCGGGTAAACTGTTCAGCCGGT 371543 || ||||| || || |||| | ||| | ||| || || ||||| || || || || Sbjct 33286 ACAGAACCACCAGAATGAGATTGAATTCCAGCTAATGGAGGATAAACAGTCCATCCTGT 33228 >seq1364 Length=53523 Score = 113 bits (124), Expect = 1e-19 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 225517 GTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCA 225576 || ||||| || || | || || || | | ||| | ||||| || || ||||| ||| Sbjct 5425 GTAGATTCCTTCTGAATGTTATAGTCAGATAGAGTGCGACCATCCTCCAGTTGCTTTCCA 5484 Query 225577 GCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTC 225636 |||||||| || ||||| ||||| || ||||| |||||||| || |||||||| |||| Sbjct 5485 GCGAAGATGAGGCGTTGCTGGTCTGGGGGAATTCCTTCCTTATCCTGGATCTTCGCCTTC 5544 Query 225637 ACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTT 225696 ||| || || || || || | ||| || || | |||||||| || || ||||| ||| Sbjct 5545 ACATTGTCTATAGTATCCGATGATTCAACTTCGAGGGTGATCGTTTTCCCAGTCAACGTT 5604 Query 225697 TT 225698 || Sbjct 5605 TT 5606 Score = 107 bits (118), Expect = 5e-18 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| || || ||||| || | |||||||| | ||| |||| ||||| Sbjct 5638 AGGACAAGGTGGAGGGTAGACTCTTTCTGAATGTTGTAATCAGACAAGGTTCGACCATCC 5697 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 || ||||| || |||||||||||||| ||||||||||| || ||||| Sbjct 5698 TCGAGCTGTTTTCCAGCGAAGATAAGACGTTGTTGGTCAGGTGGAAT 5744 >seq8065 Length=1823 Score = 84.2 bits (92), Expect = 5e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 225528 TTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAG 225587 ||||| ||||| ||| |||| || | || ||||| || || || || | |||||||| Sbjct 1648 TTGGATGTTGTAGTCGCCCAAGGTACGTCCGTCTTCAAGTTGTTTTCCGTCAAAGATAAG 1707 Query 225588 TCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGAT 225647 || |||||| || || |||||||| ||||||||||| || | |||||| |||| | Sbjct 1708 TCTTTGTTGATCAGGAGGAATACCCTCCTTGTCTTGTATTCGTGTCTTCACGTCTTCCAC 1767 Query 225648 GGTGTCTGA 225656 ||||| || Sbjct 1768 AGTGTCGGA 1776 >seq786 Length=4238 Score = 84.2 bits (92), Expect = 5e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 225528 TTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAG 225587 ||||| ||||| ||| ||| || | || ||||| ||||| || || | |||||||| Sbjct 176 TTGGATGTTGTAGTCGCTCAAGGTACGTCCGTCTTCAAGCTGTTTTCCGTCAAAGATAAG 117 Query 225588 TCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGAT 225647 || |||||| || || |||||||| ||||||||||| || | |||||| ||| || Sbjct 116 TCTTTGTTGATCAGGAGGAATACCCTCCTTGTCTTGTATTCGTGTCTTCACGTTTTCCAT 57 Query 225648 GGTGTCTGA 225656 ||||| || Sbjct 56 AGTGTCGGA 48 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192353272481630