Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq6557 116 3e-21 seq1875 109 4e-19 >seq6557 Length=2833 Score = 116 bits (128), Expect = 3e-21 Identities = 129/172 (75%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 30015 CGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGA 30074 ||||||| | ||||||||||||||||||||| |||||||| ||| | ||||||| | | Sbjct 1171 CGAAATGGCGCCACTGGAACCCGTACACCGGCCCCAGGTCGCCCGCCCTCCTGTGCCCCA 1112 Query 30075 AGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCT 30134 ||||||| || | || | | || |||||| ||||||||||||| || ||| || Sbjct 1111 GGCCCCTCCCCTCGAGGAACGCCTTCGACCCGTTGCCGTCCCAGATCTTCACGCCCCTCG 1052 Query 30135 CGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30186 ||||||| || || || || || | |||||||| ||||||||||| Sbjct 1051 CGGAGAGGAGGGCGGCGTCCGTCGAGCCGCGCACGAACCAGAGCAGCTCCTC 1000 >seq1875 Length=13504 Score = 109 bits (120), Expect = 4e-19 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 ||||| | |||||||||||| |||||||| |||| || ||||| ||| ||| | | | Sbjct 12355 AAATGGCGCCACTGGAACCCATACACCGGGCCCAAATCGCCCTCGCGCCTATGCCCCAGG 12414 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 |||| | || | || | | || |||||| ||||||||||||| || |||||| | Sbjct 12415 CCCCGCGCCTCGAGGAACGCCTTCGACCCGTTGCCGTCCCAGATCTTCACGCCCTTCGCC 12474 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 30186 || || | |||||| || || || | |||||||||||||||||||| Sbjct 12475 GACAGAAGTGTGGAGTCCGTCGAGCCGCGCACGAACCACAGCAGCTCCTC 12524 Score = 87.8 bits (96), Expect = 1e-12 Identities = 128/180 (71%), Gaps = 1/180 (1%) Strand=Plus/Plus Query 29643 TCCTC-AGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAAC 29701 ||||| |||| | |||||||| |||| ||||| || || || || | ||| | | Sbjct 11889 TCCTCGAGCGCGCCGACGTGGTCGCGGTACACGTGCGCGTCGCCGAGCTGGATGACGAGC 11948 Query 29702 TCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCG 29761 || | | || || |||||||| || | ||||| |||||| || | ||| ||| Sbjct 11949 TCCGCGGCCTCGGTGCCCGTGACGTGCGCGAGCATGTGCGTGAGCAGCGCGTACGACGCG 12008 Query 29762 ATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGC 29821 ||||| || || | ||||||||||| |||| | || | |||||| | | ||||||||||| Sbjct 12009 ATGTTGAACGGGATCCCGAGCCCCAGGTCCGCGGAGCGCTGGTACATCAGGCACGAGAGC 12068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406105555922470