Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq6557 138 8e-28 seq1875 114 1e-20 >seq6557 Length=2833 Score = 138 bits (152), Expect = 8e-28 Identities = 219/305 (72%), Gaps = 12/305 (4%) Strand=Plus/Minus Query 27382 TTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT---GAGG 27438 ||||||||||| |||| || ||||||||||| || || | | |||||| | || Sbjct 1298 TTGGGGTTCCACGCGCTCAGGATGATGCGCCGATCCGTCGGATCCTCCCTGATCTTGCGG 1239 Query 27439 -TCCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGA-GTAGTCTACC-CTCATGTCC 27495 | ||| || ||||||| ||||||||| |||||| ||| || | | || ||| Sbjct 1238 ATGCACT-CGC---GCAGCTGGTCCACCCCC-TCCCCGCTGTAATCCCGCTCGCAA-TCC 1185 Query 27496 GTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCT 27555 ||||| || |||||||| | ||| ||||||||||||||||| |||||||| ||| | Sbjct 1184 ACATACTCCGCGCCGAAATGGCGCCACTGGAACCCGTACACCGGCCCCAGGTCGCCCGCC 1125 Query 27556 TCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATC 27615 ||||||| | | ||||||| || | || | | || |||||| ||||||||||| Sbjct 1124 CTCCTGTGCCCCAGGCCCCTCCCCTCGAGGAACGCCTTCGACCCGTTGCCGTCCCAGATC 1065 Query 27616 TTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGC 27675 || || ||| || ||||||| || || || || || | |||||||| |||||| Sbjct 1064 TTCACGCCCCTCGCGGAGAGGAGGGCGGCGTCCGTCGAGCCGCGCACGAACCAGAGCAGC 1005 Query 27676 TCCTC 27680 ||||| Sbjct 1004 TCCTC 1000 >seq1875 Length=13504 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 27452 GCAGCTGATCCACCCCCATCCCCGAGTAGTCTACC-CTCATGTCCGTGTACTCTGCTCCG 27510 ||||||| ||||||||| |||| || || | | || ||| ||||| || || Sbjct 12296 GCAGCTGGTCCACCCCCTCCCCCCCATAATCCCGCTCGCAA-TCCACATACTCCGCGCCA 12354 Query 27511 AAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 27570 ||||| | ||| |||||||| |||||||| |||| || ||||| ||| ||| | | | Sbjct 12355 AAATGGCGCCACTGGAACCCATACACCGGGCCCAAATCGCCCTCGCGCCTATGCCCCAGG 12414 Query 27571 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 27630 |||| | || | || | | || |||||| ||||||||||||| || |||||| | Sbjct 12415 CCCCGCGCCTCGAGGAACGCCTTCGACCCGTTGCCGTCCCAGATCTTCACGCCCTTCGCC 12474 Query 27631 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTC 27680 || || | |||||| || || || | |||||||||||||||||||| Sbjct 12475 GACAGAAGTGTGGAGTCCGTCGAGCCGCGCACGAACCACAGCAGCTCCTC 12524 Score = 82.4 bits (90), Expect = 6e-11 Identities = 117/165 (71%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 27151 ACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGC 27210 ||||| || |||| ||||| ||||| || || | ||| | ||| | | || Sbjct 11904 ACGTGGTCGCGGTACACGTGCGCGTCGCCGAGCTGGATGACGAGCTCCGCGGCCTCGGTG 11963 Query 27211 CCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACC 27270 || |||||||| || | ||||| |||||| || | ||| |||||||| || || | | Sbjct 11964 CCCGTGACGTGCGCGAGCATGTGCGTGAGCAGCGCGTACGACGCGATGTTGAACGGGATC 12023 Query 27271 CCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGC 27315 |||||||||| |||| | || | |||||| | | | ||||||||| Sbjct 12024 CCGAGCCCCAGGTCCGCGGAGCGCTGGTACATCAGGCACGAGAGC 12068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369454758267995