Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq168 150 3e-31 seq5512 89.7 7e-13 >seq168 Length=158170 Score = 150 bits (166), Expect = 3e-31 Identities = 429/654 (66%), Gaps = 14/654 (2%) Strand=Plus/Plus Query 46537 GTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATATTATCGATGTTACTGTTTCCTCA 46596 ||||||||||| || ||||| ||||| | | ||| || | | ||||| || Sbjct 52897 GTAAGAAACTCCTGCTCAATGACAACAGCCTGAGTTATGATAGCCCTAACTGTGTCGGGG 52956 Query 46597 CTTGGTGGATGCATCAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGGCCTTCA 46656 || || || | | || | || | ||| || |||||||| || | ||||||| Sbjct 52957 TGAGGACGACGCTTGAGGTGGCTGAAGAGTAAGCACGCAAAATCGGTGTGCATGCCTTCA 53016 Query 46657 TCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGC 46716 || | ||| || | |||||| ||||| || || |||||||| | |||||||| || | | Sbjct 53017 TCACGACTGATAAGTTCGTTGGAAAAAGTAAGTCCAGGCATCAAGCCACGCTTCTTCATC 53076 Query 46717 CAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACA 46776 || || || | ||| || |||||||| ||||| || || |||||||| ||||| || || Sbjct 53077 CAGAAGATTGACGCAAACGATCCAGAGAAGAAAATACCCTCTACAGCAGCGAACGCAACG 53136 Query 46777 AGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCACCTTTGAGCCCAATCAGCCTTT 46833 || | || || | | | | |||| ||||||| | ||||| || ||||| Sbjct 53137 AGGCGTTCGCCAAATGTTGATTTCTTATCTGAAATCCACTCAAGGGCCCATTCTGCCTTG 53196 Query 46834 TTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATCACTATCT 46893 ||| | ||||| || || || || |||| ||||||| | | | | | ||| Sbjct 53197 CGCTTGATGCAAGGAATCGTCTCGATGGCATCAAAGAGATATTCACGCTGAGTAGCATCC 53256 Query 46894 TTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGCCATC 46953 || | ||| || || || | ||| ||| ||| ||||| ||||| || || || Sbjct 53257 TTGATATAAGTGTCGATGAGAAGCGAATAGGCTTCGGAATGGATGTTCTCCATCATGATT 53316 Query 46954 TGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATC-GTTCAGA 47012 || || || || ||||| | || || | || || || || | |||| | | |||| Sbjct 53317 TGGAAGCCATAGAAACAGCGCGCCTCGGCAACTTGGACTTCATTTGAAAACCTCTCCAGA 53376 Query 47013 CAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072 | ||||| || || || |||||| ||||| || || || | || || || || Sbjct 53377 -AGGTTCTCGTTGACAATACCATCAGAGGCAGCGAAGAAAGCAAGAACGTGCGAGATGAA 53435 Query 47073 A------TATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATC 47126 | | || |||| ||| | | || ||||||| | ||||||||| || | || Sbjct 53436 ATGACGCTCGTTGTCAT--TTAGAC-GGTTGGTCCAGTCGTGGATATCTTTGGAGAGGTC 53492 Query 47127 TACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATAT 47180 | || || || |||||||| |||||||| || || || ||||| | ||| || Sbjct 53493 CATCTCCTCCGCAGTCCAGAAAGACGCCTCAGCCTTCTTGTACATTTGCCAGAT 53546 >seq5512 Length=8717 Score = 89.7 bits (98), Expect = 7e-13 Identities = 190/281 (68%), Gaps = 6/281 (2%) Strand=Plus/Minus Query 76853 GCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAG 76912 ||||| ||| | |||| || || || ||||| || ||||| ||| | ||||| Sbjct 5483 GCACGGATACAATGAATATTAAGACCAATACCTCCGGCGGTTTTACTGATCATGGCACAA 5424 Query 76913 CGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAA-GAAGAA--AA 76969 ||||| || || ||||||||||| || ||||||| |||| || || ||| || Sbjct 5423 TTCTTCAACGTATCGTAGATGCCCTCAATTGAATCATCCTTCATACAAACGAGGAAGCAA 5364 Query 76970 CAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTG 77029 |||| | |||| || | || ||||| || || | || || |||||||| ||| Sbjct 5363 GAGCT---GAGTTGAGGACTAGGCGTGCCTGCGTTGAAGAGAGTGGGTGATGCATGGGTG 5307 Query 77030 AACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATCCCATTGATGA 77089 || || |||||| | || || || || | |||||| || || ||| | ||| Sbjct 5306 AAGTATCGTTCAGACATGAGGTTATAAGTCTGAATAACACGGTCGATGTCCGAGCCATGG 5247 Query 77090 ATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTC 77130 || || ||||| |||||||| | ||| ||||| || || || Sbjct 5246 ATCCCGACAGCAACACGCATTATCATGTGCTGTGGACGCTC 5206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712830623486400