Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2477 136 9e-27 seq1364 93.3 1e-13 >seq2477 Length=31422 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||| |||||||| || ||||| || |||||||||||||| | | || | |||||| Sbjct 19475 GAGGACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTCCGCCCATC 19416 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 ||| || |||||||| || || | | ||||||||| | | ||||||||||| || Sbjct 19415 TTCGAGCTGCTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGGAGGAATTCCTTCCTTGTC 19356 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||| || || ||||| | || | |||| ||| ||| || || ||||| || || Sbjct 19355 TTGGATCTTAGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCCAGAGTGATGGT 19296 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||||||||| || |||| |||||| Sbjct 19295 CTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 19263 Score = 107 bits (118), Expect = 4e-18 Identities = 148/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 151899 AGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGG 151958 ||||| || |||||||| || || |||||||| || | | || | ||| || || || Sbjct 18907 AGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGT 18848 Query 151959 CTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATT 152018 |||||| |||||||| | | |||||||| | | ||| ||||| || ||||| || Sbjct 18847 TGTTTCCCAGCGAAGATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATC 18788 Query 152019 TTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCC 152078 || || ||| | || | |||| || ||| || || | ||| || || |||||| Sbjct 18787 TTGGCCTTCACATTATCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCC 18728 Query 152079 GTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| ||||| ||||||| ||||||| Sbjct 18727 GTGAGGGTCTTGACGAAGATCTGCATT 18701 Score = 84.2 bits (92), Expect = 5e-11 Identities = 144/208 (69%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| |||||||| |||||| ||||||||||| || | | || | ||||| || | Sbjct 19697 CAAG-TGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGA 19639 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | || || || ||||| || | ||| ||||| | | ||| || ||||| || |||| Sbjct 19638 GCTGCTTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAA 19579 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || ||||| | || | |||| || ||| || || || || || || || | Sbjct 19578 TCTTCGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCC 19519 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | ||||| ||||| ||||| | |||||| Sbjct 19518 CGGTGAGGGTCTTGACGAATATCTGCAT 19491 >seq1364 Length=53523 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||||||||| || ||| ||||| |||||||| || | | ||| | ||||| || | Sbjct 5186 CAAGATGAAGGGTGCTCTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTCCA 5245 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||||| ||||| || || | ||| || || | | || || || || ||||| | Sbjct 5246 ACTGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTGGA 5305 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || || | || | | | || ||| ||| || ||||| || || ||||| | Sbjct 5306 TTTTCGCCTTCACGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTTTCC 5365 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATT 152105 | || |||||||||||||| | ||||||| Sbjct 5366 CGGTTAGAGTCTTCACGAAAATCTGCATT 5394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153648648133795