Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq1364 176 9e-39 seq2477 167 5e-36 seq168 127 4e-24 seq786 87.8 4e-12 seq8065 84.2 5e-11 >seq1364 Length=53523 Score = 176 bits (194), Expect = 9e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||||||||| || || |||||||| || ||| || || ||||| ||||||| Sbjct 5395 CCACCACGCAGGCGGAGAACGAGATGTAATGTAGATTCCTTCTGAATGTTATAGTCAGAT 5454 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| |||||||| ||||| || || || ||||| | ||||| ||||| ||| Sbjct 5455 AGAGTGCGACCATCCTCCAGTTGCTTTCCAGCGAAGATGAGGCGTTGCTGGTCTGGGGGA 5514 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||| || |||||||| || || || | || ||||| ||||| | ||| ||| Sbjct 5515 ATTCCTTCCTTATCCTGGATCTTCGCCTTCACATTGTCTATAGTATCCGATGATTCAACT 5574 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| |||||||| || || ||||| || || || || |||||||| Sbjct 5575 TCGAGGGTGATCGTTTTCCCAGTCAACGTTTTGACAAAGATCTGCAT 5621 Score = 149 bits (164), Expect = 1e-30 Identities = 161/212 (76%), Gaps = 1/212 (0%) Strand=Plus/Plus Query 282890 TACCA-GATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCT 282948 ||||| |||| | ||||| || ||||| ||||||||||||| ||| || || ||||||| Sbjct 5183 TACCAAGATGAAGGGTGCTCTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCT 5242 Query 282949 CTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTT 283008 | | || ||||| || || |||| || ||||| ||| ||||| ||||| || |||| Sbjct 5243 CCAACTGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTT 5302 Query 283009 GGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCT 283068 |||| || || || ||| | ||||| || || |||| || || || || ||||| || | Sbjct 5303 GGATTTTCGCCTTCACGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTT 5362 Query 283069 TACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 | || || | |||||| ||||| ||||||||| Sbjct 5363 TCCCGGTTAGAGTCTTCACGAAAATCTGCATT 5394 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 || |||||||||||||| || || || || |||| || || || |||| |||||| || Sbjct 6081 CCTTCCTTGTCTTGGATTTTGGCCTTGACATTATCAATGGTATCAGAAGATTCGACCTCA 6140 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||||||||| || || | ||||| || || |||||||| Sbjct 6141 AGGGTGATCGTCTTTCCAGTAAGGGTCTTCACAAAGATCTGCAT 6184 >seq2477 Length=31422 Score = 167 bits (184), Expect = 5e-36 Identities = 155/197 (79%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCG 282962 ||||| ||||| |||||||||||||| | || ||||| |||||||| || || || || Sbjct 19687 GTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGAGCTGCTTGCCA 19628 Query 282963 GCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTT 283022 |||||||||| ||| |||||||| || || ||||||||||| || ||||| || || Sbjct 19627 GCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTG 19568 Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082 ||| | ||||| ||||| || | ||||| || || ||||| ||||| || || | ||| Sbjct 19567 ACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCCCGGTGAGGGTC 19508 Query 283083 TTAACGAATATCTGCAT 283099 || |||||||||||||| Sbjct 19507 TTGACGAATATCTGCAT 19491 Score = 163 bits (180), Expect = 6e-35 Identities = 173/228 (76%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| || || || || || ||||| | || || || ||||||||||| || | Sbjct 19490 ACCACCCCGAAGACGGAGGACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAATCCGA 19431 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || ||||| || || || ||||||||||| ||||| || || ||||| || Sbjct 19430 GAGGGTCCGCCCATCTTCGAGCTGCTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGGAGG 19371 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||||||||| || || ||| | ||||| ||||| |||| ||||| Sbjct 19370 AATTCCTTCCTTGTCTTGGATCTTAGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGAC 19311 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | |||||| || || |||||||| Sbjct 19310 CTCCAGAGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 19263 Score = 158 bits (174), Expect = 3e-33 Identities = 150/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||||||||||| || || || || ||||| ||||||||||| || ||| Sbjct 18892 TCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCTCGAGTTGTTTCCCAGCGAAG 18833 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||||||||| |||||| || || || || |||||||||||||| || || || || Sbjct 18832 ATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTTGGATCTTGGCCTTCACATTA 18773 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| || | || || || | |||||| ||||| ||||| | ||||| ||| Sbjct 18772 TCAATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTCTTGCCCGTGAGGGTCTTGACG 18713 Query 283089 AATATCTGCATT 283100 || ||||||||| Sbjct 18712 AAGATCTGCATT 18701 Score = 147 bits (162), Expect = 5e-30 Identities = 147/191 (77%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || || ||||| || || | ||| || || || ||||| || || || || |||||| Sbjct 19176 TCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGAGCTGCTTGCCAGCAAAG 19117 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||||||| || ||||| ||||||||||||||||| |||||||| || || || | Sbjct 19116 ATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGATCTTAGCCTTGACATTG 19057 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 ||||| ||||| |||| |||||||| | || || ||||| ||||||| ||||| ||| Sbjct 19056 TCGATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTTTCCCGTCAGGGTCTTGACG 18997 Query 283089 AATATCTGCAT 283099 || || ||||| Sbjct 18996 AAGATTTGCAT 18986 Score = 93.3 bits (102), Expect = 9e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 || ||||| ||||||||||| ||||| || | ||||| || ||||| | ||||| ||| Sbjct 18524 CCTTCCTTATCTTGGATCTTGGCTTTGACATTGTCGATGGTATCCGAGGACTCGACCTCG 18465 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| ||||| || || | |||||| ||||| |||||||| Sbjct 18464 AGGGTGATAGTCTTGCCAGTAAGAGTCTTGACGAAGATCTGCAT 18421 >seq168 Length=158170 Score = 127 bits (140), Expect = 4e-24 Identities = 149/200 (75%), Gaps = 1/200 (1%) Strand=Plus/Minus Query 230205 GACGCTATTCCTTGCCGTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAA 230264 ||||| ||||| | || |||||||||||| |||| | ||| | || || ||||| Sbjct 52841 GACGCACTTCCTGTCAAACTCATCGGCATGAATTCTGACTTGATGTGCCAGTACATCGAG 52782 Query 230265 TTCGTAGCTGATCGTATTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAAC 230324 ||||| || || || | | || || || || |||| || ||||| || || | ||| Sbjct 52781 TTCGTTGCCGACCGACTACTTGTCGCTCTGGGCAACGACAAGGTGTACAATTCGACGAAT 52722 Query 230325 CCCTTCGCTTTTATGGAGCTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGT 230384 ||||||| || ||||| | |||||||||||||||||||| || ||||| ||||||||| Sbjct 52721 CCCTTCGACTTCATGGACATGATTTCACTCCAGGGGAAAACGAATTTCTTTGAAAAGCGT 52662 Query 230385 GTCAGCGATTA-TCAAAGGC 230403 || |||||| || ||||| Sbjct 52661 GTTTCCGATTACTCCAAGGC 52642 >seq786 Length=4238 Score = 87.8 bits (96), Expect = 4e-12 Identities = 99/130 (76%), Gaps = 2/130 (2%) Strand=Plus/Minus Query 282914 TTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCA 282972 ||||||||||||||| |||| || || || || || || ||||| ||| ||||||| | Sbjct 176 TTGGATGTTGTAGTCGCTCAAG-GTACGTCCGTCTTCAAGCTGTTTTCCGTCAAAGATAA 118 Query 282973 AACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGA 283032 | |||||| ||| |||||||||||||||||||| || || || ||| | || | Sbjct 117 GTCTTTGTTGATCAGGAGGAATACCCTCCTTGTCTTGTATTCGTGTCTTCACGTTTTCCA 58 Query 283033 TAGTGTCCGA 283042 ||||||| || Sbjct 57 TAGTGTCGGA 48 >seq8065 Length=1823 Score = 84.2 bits (92), Expect = 5e-11 Identities = 78/99 (79%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 282914 TTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAA 282973 ||||||||||||||| | | || || || || || |||||||| ||| ||||||| | Sbjct 1648 TTGGATGTTGTAGTCGCCCAAGGTACGTCCGTCTTCAAGTTGTTTTCCGTCAAAGATAAG 1707 Query 282974 ACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGAT 283012 | |||||| ||| |||||||||||||||||||| || Sbjct 1708 TCTTTGTTGATCAGGAGGAATACCCTCCTTGTCTTGTAT 1746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046583024875830