Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq168 149 7e-31 seq331 93.3 4e-14 >seq168 Length=158170 Score = 149 bits (164), Expect = 7e-31 Identities = 298/440 (68%), Gaps = 4/440 (1%) Strand=Plus/Plus Query 23505 TAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGT 23564 ||| || |||||||| || | ||||||||| | ||| || | ||| || ||||| || Sbjct 52986 TAAGCACGCAAAATCGGTGTGCATGCCTTCATCACGACTGATAAGTTCGTTGGAAAAAGT 53045 Query 23565 TAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAA 23624 | ||| ||||| || || || || || ||||| || |||| ||||| ||||| || || Sbjct 53046 AAGTCCAGGCATCAAGCCACGCTTCTTCATCCAGAAGATTGACGCAAACGATCCAGAGAA 53105 Query 23625 GAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATC 23684 |||||||||||| ||||| || || || || || ||| |||||||||| || | ||| Sbjct 53106 GAAAATACCCTCTACAGCAGCGAACGCAACGAGGCGTTCGCCAAATGTTGATTTCTTATC 53165 Query 23685 AGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTGC 23744 |||||||| | | ||| | ||||| || | || ||| || || || || Sbjct 53166 TGAAATCCACTCAAGGGCCCATTCTGCCTTGCGCTTGATGCAAGGAATCGTCTCGATGGC 53225 Query 23745 TTTTAAGAGAAAAGTTTTTTCT--TCATTATCTGTTATATATGTATCAATTAGTAAACTA 23802 | |||||| | || || | ||| | ||||| || || || || | | Sbjct 53226 ATCAAAGAGATA--TTCACGCTGAGTAGCATCCTTGATATAAGTGTCGATGAGAAGCGAA 53283 Query 23803 TACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCA 23862 || ||| ||||| || || || || || || || ||||| ||||| | || || Sbjct 53284 TAGGCTTCGGAATGGATGTTCTCCATCATGATTTGGAAGCCATAGAAACAGCGCGCCTCG 53343 Query 23863 GACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTA 23922 | | ||| || ||||| |||| || | | || ||||| |||||||||||| Sbjct 53344 GCAACTTGGACTTCATTTGAAAACCTCTCCAGAAGGTTCTCGTTGACAATACCATCAGAG 53403 Query 23923 GCAGCAAAGAAAGCAAGAAC 23942 ||||| |||||||||||||| Sbjct 53404 GCAGCGAAGAAAGCAAGAAC 53423 >seq331 Length=21972 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 23511 TGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCC 23570 |||||| || || || ||||| |||| || | ||| || ||||| |||||| Sbjct 15759 TGCAAATTCTGTGTGAAGCCCTTCGTCCCGGGAGATAAGTTCGTTCGAAAAGCATAATCC 15700 Query 23571 TGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAAT 23630 |||||| |||||||||||||| | ||||||||| | || || ||| ||||| ||||| Sbjct 15699 TGGCATCAATCCTCGTTTTTTCAACCAAAATATAGATGCGAAGGATGATGAAAAAAAAAT 15640 Query 23631 ACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGAAAT 23690 |||||||| || || || || | | ||||| |||||| || || ||| || Sbjct 15639 CCCCTCAACCGCTGCGAATGCTAGTAAGCGTGTCGCAAATGGCACAGTAGTATCTTCGAT 15580 Query 23691 CCAtttttttGTCCAATTAGCCTT 23714 |||||| ||||||||| || Sbjct 15579 CCATTTGAGGCACCAATTAGCTTT 15556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521412090903000