Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2477 147 5e-30 seq1364 134 3e-26 seq142 84.2 5e-11 >seq2477 Length=31422 Score = 147 bits (162), Expect = 5e-30 Identities = 156/206 (76%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || |||||||| || || || ||||| || ||||| || || ||| Sbjct 19266 CAGATCTTTGTCAAGACTCTCACCGGCAAGACCATCACTCTGGAGGTCGAGTCTTCCGAC 19325 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| ||||| || ||||| |||||||| ||||| |||||||| Sbjct 19326 ACGATCGACAACGTCAAGGCTAAGATCCAAGACAAGGAAGGAATTCCTCCCGACCAGCAG 19385 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || || ||||| || |||||||||||||| |||| || | ||||| ||| || Sbjct 19386 CGCTTGATTTTTGCCGGGAAGCAGCTCGAAGATGGGCGGACCCTCTCGGATTACAACATC 19445 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || ||||| ||||| || Sbjct 19446 CAGAAGGAGTCGACACTTCATCTCGT 19471 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || ||||| || || ||| | || || || |||||| Sbjct 18989 CAAATCTTCGTCAAGACCCTGACGGGAAAGACCATTACCTTGGAAGTCGAGTCTTCAGAC 19048 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||| |||||||| || || || || || |||||||| Sbjct 19049 ACCATCGACAATGTCAAGGCTAAGATCCAGGACAAGGAGGGTATTCCCCCCGACCAGCAG 19108 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || |||||||| || || | |||||| | ||||||||| | Sbjct 19109 CGTTTGATCTTTGCTGGCAAGCAGCTCGAGGACGGTCGTACTCTTTCGGATTATAACATT 19168 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || || || ||||| ||||| Sbjct 19169 CAGAAGGAGTCGACACTCCATCT 19191 Score = 127 bits (140), Expect = 5e-24 Identities = 141/188 (75%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || |||||||| ||||| || || ||| Sbjct 19494 CAGATATTCGTCAAGACCCTCACCGGGAAGACCATCACCCTGGAGGTCGAGTCGTCTGAC 19553 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| |||||||| |||||||||||||| || || ||||| || ||||| || Sbjct 19554 ACGATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCCCCCGACCAACAG 19613 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||| || || || |||||||| ||||| | || || | || || ||| || Sbjct 19614 CGTCTGATCTTTGCTGGCAAGCAGCTCGAGGATGGTCGCACCCTCTCGGACTACAACATC 19673 Query 178104 CAAAAAGA 178111 || ||||| Sbjct 19674 CAGAAAGA 19681 Score = 114 bits (126), Expect = 3e-20 Identities = 147/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || ||||| || || || ||||| | ||||| || ||| ||| Sbjct 18705 CAGATCTTCGTCAAGACCCTCACGGGCAAGACCATCACTTTGGAGGTTGAGTCCTCTGAC 18764 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| || ||||||||||| ||||| || ||||||||| Sbjct 18765 ACGATTGATAATGTGAAGGCCAAGATCCAAGACAAAGAAGGCATCCCCCCTGACCAGCAA 18824 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | |||||||| || ||||| ||||| || || | || || | || || ||| | Sbjct 18825 CGTTTGATCTTCGCTGGGAAACAACTCGAGGACGGGCGTACCCTCTCTGACTACAACATT 18884 Query 178104 CAAAAAGAATCAACACTGCATCT 178126 || || || || || || ||||| Sbjct 18885 CAGAAGGAGTCTACCCTCCATCT 18907 >seq1364 Length=53523 Score = 134 bits (148), Expect = 3e-26 Identities = 154/207 (74%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || ||||| | || || ||||||||||||||||| || ||| || || Sbjct 5618 CAGATCTTTGTCAAAACGTTGACTGGGAAAACGATCACCCTCGAAGTTGAATCATCGGAT 5559 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || ||||| ||||| || |||||||| || || ||||||||| Sbjct 5558 ACTATAGACAATGTGAAGGCGAAGATCCAGGATAAGGAAGGAATTCCCCCAGACCAGCAA 5499 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || |||||||| ||||| || || || ||||| | ||||| | || |||||| | Sbjct 5498 CGCCTCATCTTCGCTGGAAAGCAACTGGAGGATGGTCGCACTCTATCTGACTATAACATT 5439 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || ||||| ||| | ||||| ||| Sbjct 5438 CAGAAGGAATCTACATTACATCTCGTT 5412 Score = 122 bits (134), Expect = 2e-22 Identities = 150/205 (73%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || ||||||||||| ||||| || || ||||| |||||||| ||||| || || || Sbjct 5390 CAGATTTTCGTGAAGACTCTAACCGGGAAAACCATCACCCTTGAGGTTGAGTCTTCCGAT 5331 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| || || || || || ||||| || || ||||| || || || Sbjct 5330 ACCATCGACAACGTGAAGGCGAAAATCCAAGATAAAGAGGGGATTCCTCCTGATCAACAG 5271 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || || ||||| || || ||| | || |||||| | |||||| | || || ||| | Sbjct 5270 CGCCTGATATTCGCGGGGAAGCAGTTGGAGGATGGACGTACTCTTTCTGACTACAACATT 5211 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 ||||| || || || ||||||| Sbjct 5210 CAAAAGGAGAGCACCCTTCATCTTG 5186 Score = 86.0 bits (94), Expect = 2e-11 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 ||||| || || |||||||| | || || ||||| || || ||||||||||| ||||| Sbjct 6026 ATCCCACCCGATCAGCAACGTTTGATTTTTGCCGGGAAGCAACTCGAAGATGGTCGGACT 5967 Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 | ||||||||||| | || ||||| ||||| || || |||||| Sbjct 5966 TTATCCGATTATAACATACAGAAAGAGTCAACCCTCCACCTTGTT 5922 Score = 84.2 bits (92), Expect = 5e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 || || || ||||| ||||| ||||||||||| |||||||||||||| ||||| | || Sbjct 5744 ATTCCACCTGACCAACAACGTCTTATCTTCGCTGGAAAACAGCTCGAGGATGGTCGAAC- 5686 Query 178086 CTTG-CCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 |||| | ||||| ||| | || ||||| || || || || ||||| Sbjct 5685 CTTGTCTGATTACAACATTCAGAAAGAGTCTACCCTCCACCTTGT 5641 >seq142 Length=14559 Score = 84.2 bits (92), Expect = 5e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 178024 GAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGA 178083 ||||||| || || |||||||| || ||||||||||| || ||||| || ||||| | | Sbjct 5320 GAATCCCCCCCGATCAGCAACGCCTGATCTTCGCCGGCAAGCAGCTGGAGGATGGTCGCA 5261 Query 178084 CTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129 | || ||| || ||| ||||||| || || || || |||||||| Sbjct 5260 CCCTCAGCGACTACAACATCCAAAAGGAGTCTACCCTTCATCTTGT 5215 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203551601424130