Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lepista_20sordida_20[genbank_20GCA_5F900168675.1_202017-06-15] 11,645 sequences; 56,651,772 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq2477 149 6e-31 seq1364 127 2e-24 seq142 89.7 5e-13 >seq2477 Length=31422 Score = 149 bits (164), Expect = 6e-31 Identities = 157/204 (77%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 41660 TGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGC 41719 || || |||||||| ||||| ||||| ||||| ||||||||||| | || ||||||||| Sbjct 19693 TGAAGAGTGCTCTCTTTCTGGATGTTGTAGTCCGAGAGGGTGCGACCATCCTCGAGCTGC 19634 Query 41720 TTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTT 41779 ||||| || || ||||| ||||||||||| | ||| | || |||||||||| ||| | || Sbjct 19633 TTGCCAGCAAAGATCAGACGCTGTTGGTCGGGGGGGATGCCCTCCTTGTCC-TGAATCTT 19575 Query 41780 TGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGT 41838 || | ||| | | | ||||| |||||| ||||||| || || || || || || Sbjct 19574 CGCCTTGACGTTGTCGATCGTGTCAGACGACTCGACCTCCAGGGTGATGGTCTTCCCGGT 19515 Query 41839 CAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| ||||| |||||||| Sbjct 19514 GAGGGTCTTGACGAATATCTGCAT 19491 Score = 125 bits (138), Expect = 7e-24 Identities = 155/210 (74%), Gaps = 4/210 (2%) Strand=Plus/Minus Query 41655 CCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGA 41714 ||||||| || || |||||||||||||||||| || || || || || |||| |||| Sbjct 19193 CCAGATGGAGTGTCGACTCCTTCTGAATGTTATAATCCGAAAGAGTACGACCGTCCTCGA 19134 Query 41715 GCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGA 41774 |||||||||| || || |||| ||||| ||||| | ||||| | |||||||||| || Sbjct 19133 GCTGCTTGCCAGCAAAGATCAAACGCTGCTGGTCGGGGGGAATACCCTCCTTGTCCTGGA 19074 Query 41775 TTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTT 41832 | || ||| || | || | ||||| ||||| || |||| || || || || Sbjct 19073 TCTTAGCCTTGACATTGTCG--ATGGTGTCTGAAGACTCGACTTCCAAGGTAATGGTCTT 19016 Query 41833 ACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||||| ||||| ||||| || ||||| Sbjct 19015 TCCCGTCAGGGTCTTGACGAAGATTTGCAT 18986 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || || ||||||||| ||||| || || ||| Sbjct 19489 CCACCCCGAAGACGGAGGACGAGATGAAGTGTCGACTCCTTCTGGATGTTGTAATCCGAG 19430 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| ||| | || ||||||||||| ||||| || |||| |||||| ||||| | ||| Sbjct 19429 AGGGTCCGCCCATCTTCGAGCTGCTTCCCGGCAAAAATCAAGCGCTGCTGGTCGGGAGGA 19370 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||| | || | || || | ||| | | | |||||| ||||| || Sbjct 19369 ATTCCTTCCTTGT-CTTGGATCTTAGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGAC 19311 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || || || || || ||||| || || |||||||| Sbjct 19310 CTCCAGAGTGATGGTCTTGCCGGTGAGAGTCTTGACAAAGATCTGCAT 19263 Score = 114 bits (126), Expect = 1e-20 Identities = 155/212 (73%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 41653 CACC-AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 |||| ||||| || || ||||||||||||||| ||||| |||||||| ||| |||| | Sbjct 18912 CACCGAGATGGAGGGTAGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTACGCCCGTCCT 18853 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771 |||| || || || ||||| |||| || || ||||| | ||| | || || ||||| Sbjct 18852 CGAGTTGTTTCCCAGCGAAGATCAAACGTTGCTGGTCAGGGGGGATGCCTTCTTTGTCTT 18793 Query 41772 TGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| || ||||| | | | | ||||| ||||| ||||||| || || || Sbjct 18792 GGATCTTGGCCTTCACATTATCA-ATCGTGTCAGAGGACTCAACCTCCAAAGTGATGGTC 18734 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || ||||| || ||||| ||||| |||||||| Sbjct 18733 TTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 18702 >seq1364 Length=53523 Score = 127 bits (140), Expect = 2e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 41657 AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGC 41716 ||||| || ||||||||||| |||||||| ||||| || || || || | || || | | Sbjct 5188 AGATGAAGGGTGCTCTCCTTTTGAATGTTGTAGTCAGAAAGAGTACGTCCATCCTCCAAC 5247 Query 41717 TGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATT 41776 ||||| || |||||||||||||||||||| || | |||| | ||| || || |||| Sbjct 5248 TGCTTCCCCGCGAATATCAGGCGCTGTTGATCAGGAGGAATCCCCTCTTTATCTTGGATT 5307 Query 41777 TTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACC 41835 || |||| ||| | | | || ||| ||||| ||||| | || || ||||| || Sbjct 5308 TTCGCCTTC-ACGTTGTCGATGGTATCGGAAGACTCAACCTCAAGGGTGATGGTTTTCCC 5366 Query 41836 CGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || ||||| |||||||||||||| Sbjct 5367 GGTTAGAGTCTTCACGAAAATCTGCAT 5393 Score = 98.7 bits (108), Expect = 9e-16 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 41672 TCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAAT 41731 |||||||||||||||||||| || || ||||| | || || || ||||| || ||||| Sbjct 5431 TCCTTCTGAATGTTATAGTCAGATAGAGTGCGACCATCCTCCAGTTGCTTTCCAGCGAAG 5490 Query 41732 ATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGAC 41791 || ||||| || ||||| | ||||| | ||||| ||| ||| || |||| || Sbjct 5491 ATGAGGCGTTGCTGGTCTGGGGGAATTCCTTCCTTATCCTGGATCTTCGCCTTC-ACATT 5549 Query 41792 GAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 | | | ||| || || || || || | || |||||||| || |||| ||| || || Sbjct 5550 GTCTATAGTATCCGATGATTCAACTTCGAGGGTGATCGTTTTCCCAGTCAACGTTTTGAC 5609 Query 41851 GAAAATCTGCATG 41863 || ||||||||| Sbjct 5610 AAAGATCTGCATG 5622 >seq142 Length=14559 Score = 89.7 bits (98), Expect = 5e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || || |||||| || ||||| |||||| | Sbjct 5197 CCACCACGGAGACGGAGGACAAGATGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGCTG 5256 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||||| | || || ||||||||||||||||| |||||||| || || || | ||| Sbjct 5257 AGGGTGCGACCATCCTCCAGCTGCTTGCCGGCGAAGATCAGGCGTTGCTGATCGGGGGG 5315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462236705874000