Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1104 143 3e-29 >seq1104 Length=249415 Score = 143 bits (158), Expect = 3e-29 Identities = 301/445 (68%), Gaps = 8/445 (2%) Strand=Plus/Minus Query 16961 AGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTC 17020 |||||||| || || ||| | ||||||||| | || || ||||||||| | || Sbjct 196825 AGACATGCAAAGTCTGTATGCATTCCCTCGTCGCGAGATATGAGCTCGTTAGAATAGGTA 196766 Query 17021 AACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAG 17080 | || ||||| ||| ||||| |||| ||||||||| || ||||| || ||||| || Sbjct 196765 AGGCCAGGCATTAATCCACGTTTTTTTATCCAAAATATGGCAGCGAAGGAACCAGAGAAA 196706 Query 17081 AATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTA 17140 || | || ||||| | ||||| || || | ||||| || | || || | || | Sbjct 196705 AACACGCCTTCGACCGCGGCAAATGCAATAAGACGTTCCGCAAATGTGAGGT-TGTGATC 196647 Query 17141 CGAA-TCCATTTCTGCA---CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTAT 17196 ||| |||| | ||| |||| ||||||| | || || || || || || Sbjct 196646 TGAAATCCA---CCGCAAAGCCCAAGCGGCTTTACGTTTGATCGTCGGGATGGTCTCAAT 196590 Query 17197 GGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCT 17256 ||| | ||| | | | ||| | |||| | | ||| || || ||||| || Sbjct 196589 GGCATCAAAAAGATGTGCCCGTTCGTCAGGGTCCTTAACATAGGTGTCTATGAGCAGAGA 196530 Query 17257 GTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTC 17316 || |||| ||||| ||||||||||| ||||| || ||||| ||||||| ||||| Sbjct 196529 ATAGGTTTCTGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCTCGCTTC 196470 Query 17317 CGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCT 17376 ||| | ||||||||| | || | |||| | ||||| |||||||| || || ||| Sbjct 196469 CGCGACTTGAACTTCGTTTGAAAACCTTTCCACGAGATTCTCGTTCACAATTCCATCGGA 196410 Query 17377 CGCGGCGAAAAACGCCAATATATGC 17401 |||||||| ||||| | ||| ||| Sbjct 196409 GGCGGCGAAGAACGCGAGTATTTGC 196385 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517413257120760