Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq1104 233 2e-56 seq221 118 1e-21 >seq1104 Length=249415 Score = 233 bits (258), Expect = 2e-56 Identities = 401/578 (69%), Gaps = 23/578 (4%) Strand=Plus/Minus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| || |||||||| || |||||||||| |||||| ||||||| Sbjct 194601 ATCTGGCAAATGTACAAGAAAGCCGAGGCATCCTTCTGGACCGCCGAGGAAATGGACCTC 194542 Query 116696 TCCAAGGACACGAGCGACTGGG---AGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 |||||||| | | || ||| | || |||||||||||||||| || ||||| Sbjct 194541 TCCAAGGATCTGCGTGATTGGACCAACCGTATGAACGACAACGAGCGTCACTTCATTTCA 194482 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 |||||||| ||||| || |||||| ||| ||||| ||||| ||||| || || || ||| Sbjct 194481 CACGTGCTCGCCTTCTTTGCCGCCTCCGATGGCATTGTCAATGAGAACCTTGTGGAACGT 194422 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | || || |||| || || || || |||||||| || || || || ||| Sbjct 194421 TTCTCCAATGAAGTCCAGGCTGCTGAAGCTCGATGCTTCTATGGATTCCAAATTATGATG 194362 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT--------GCGCT 116924 || ||| | || || |||| ||||| |||||| || || || | ||| Sbjct 194361 GAAAACATACATTCCGAAACCTATTCCCTCCTCATTGATACCTATATCAAGGATCCCGCA 194302 Query 116925 CTTCGGAGGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGA 116984 | || ||| | ||| |||| | ||||| || || || || || |||| | Sbjct 194301 CAGCG--CGAGTATCTC--TTTG----ATGCCATTGACACCATCCCTTGTATCAAGCGTA 194250 Query 116985 AGGCCGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGG 117044 | || |||||||| || |||||| | | | || | || | || || || | Sbjct 194249 AAGCGGAGTGGGCCTTGAAGTGGATCTCTGATCAACGCTCCACTTTTGCTGAACGTCTTG 194190 Query 117045 TGGCCTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGC 117104 |||||||||| || || ||||| ||||||| || || || ||||| || || ||| Sbjct 194189 TGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCTGGGTCCTTTGCCGCTATCTTCTGGA 194130 Query 117105 TCAAGAAACGCGGCCTCATGCCCGGCCTGAC--TTTCAGCAACGAGCTCATCTCCAGGGA 117162 | ||||| |||||||||||||| || || || ||||| |||||||| ||| | || Sbjct 194129 TGAAGAAGCGCGGCCTCATGCCGGGTCTTACCTTTTCA--AACGAGCTTATCAGTCGTGA 194072 Query 117163 CGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCA 117200 || || |||| |||||| ||||||||||| |||| Sbjct 194071 TGAAGGCATGCACACCGACTTCGCCTGTTTGCTCTTCA 194034 Score = 174 bits (192), Expect = 2e-38 Identities = 378/560 (68%), Gaps = 13/560 (2%) Strand=Plus/Plus Query 116639 TGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCC 116698 ||||| | || || || || | || || ||||||||||| || || | || || ||| Sbjct 196269 TGGCGGTTCTATAAGAAAGCTCAAGCATCTTTCTGGACCGTTGAAGAAATAGATCTATCC 196328 Query 116699 AAGGACACGAGCGACTGGGAGC---GCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 || ||| | |||||| || | ||||| ||||||||| || ||| ||| Sbjct 196329 AATGACCTTATGGACTGGACGCATCGAATGAACAGTGACGAGCGCCGATTTATCTCGCAA 196388 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 | || || || ||||||||| ||| || || || ||||||||||| || || | || Sbjct 196389 ATACTCGCGTTCTTCGCCGCCTCCGATGGAATTGTGAACGAGAATCTCGTGGAAAGGTTT 196448 Query 116816 GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAG 116875 | | || || || || || || ||| | |||||||||||||| |||||| |||||| Sbjct 196449 TCAAACGAAGTTCAAGTCGCGGAAGCGAGATGCTTCTACGGCTTCCAGATCATGATGGAG 196508 Query 116876 AACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCT-TCGGA 116931 ||| | ||||| |||| ||||| ||||| ||||| || || | | || || | Sbjct 196509 AACATCCACTCAGAAACCTATTCTCTGCTCATAGACACCTATGTTAAGGACCCTGACGAA 196568 Query 116932 GGAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGA 116991 | | | || |||| | ||||| ||||| || ||| ||||| || |||| Sbjct 196569 CGGGCACATCTTTTTG----ATGCCATTGAGACCATCCCGACGATCAAACGTAAAGCCGC 196624 Query 116992 GTGGGCGCTGCGCTGGATCGCCG-GCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCCT 117050 ||||| |||| ||||| | | || | | | | || | || || || | || | Sbjct 196625 TTGGGCTTTGCGGTGGATTTCAGATCACA-ACCTCACATTTGCGGAACGTCTTATTGCAT 196683 Query 117051 TCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGA 117110 | || || ||||| ||||| || || || || ||||| |||||||||||| | || | Sbjct 196684 TTGCCGCGGTCGAAGGCGTGTTTTTCTCTGGTTCCTTCGCTGCCATATTTTGGATAAAAA 196743 Query 117111 AACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTC 117170 |||| || | ||||| ||||| || | ||||||||||| || | |||||||| Sbjct 196744 AACGTGGATTAATGCCTGGCCTTACCTATTCTAACGAGCTCATATCTCGCGACGAGGGAA 196803 Query 117171 TGCATTGCGACTTTGCCTGT 117190 ||||| |||||||| ||| Sbjct 196804 TGCATACAGACTTTGCATGT 196823 >seq221 Length=834679 Score = 118 bits (130), Expect = 1e-21 Identities = 152/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| || || || | || |||||| | | Sbjct 212543 ATGCAGATTTTCGTCAAGACCCTCACGGGCAAGACGATTACTCTGGAAGTCGAATCGTCT 212484 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| | |||| || |||| ||||| ||||| |||||| | || || Sbjct 212483 GATACCATCGACAACG-TGAAGGCGAAGATTCAGGACAAGGAGGGTATCCCCCCTGATCA 212425 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||| || || |||| ||| || ||||||||||| || | || ||| | ||||||||| Sbjct 212424 GCAGCGCCTTATCTTCGCTGGTAAACAGCTGGAGGATGGTCGTACCTTGTCCGACTACAA 212365 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCT 40895 ||| ||||||||| ||| || || || Sbjct 212364 CATTCAGAAGGAGAGCACCCTCCACCT 212338 Score = 96.9 bits (106), Expect = 4e-15 Identities = 143/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || || || || || ||||| ||||| || || ||| | || ||||| || || Sbjct 212771 ATGCAGATTTTTGTCAAGACTCTCACTGGCAAGACTATTACCCTTGAGGTCGAGTCCTCC 212712 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 || | | | | | |||| ||| || | || || ||||| || || | || || Sbjct 212711 GATACTATCGACAATGTAAAGGCAAAGATCCAGGATAAGGAGGGTATTCCTCCCGATCAA 212652 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| ||||||| ||| || || || || || || | |||||||| ||||||||| Sbjct 212651 CAACGTCTCATCTTCGCTGGAAAGCAACTCGAAGATGGTCGCACCCTTTCTGACTACAAC 212592 Query 40870 ATCCAGAAGGAGGCCACGCTGCA 40892 |||||||||||| | || || || Sbjct 212591 ATCCAGAAGGAGTCGACTCTCCA 212569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515087452010320