Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq1104 147 2e-30 >seq1104 Length=249415 Score = 147 bits (162), Expect = 2e-30 Identities = 297/441 (67%), Gaps = 0/441 (0%) Strand=Plus/Minus Query 16231 TATACAAGCAAAATCACAATGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGT 16290 || ||| ||||| || ||||| ||| ||||| | | ||| | |||||| ||| | || Sbjct 196826 TAGACATGCAAAGTCTGTATGCATTCCCTCGTCGCGAGATATGAGCTCGTTAGAATAGGT 196767 Query 16291 AAGACCTGGCATTAGTCCTCGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAA 16350 ||| || ||||||| ||| |||||||| ||||||||||| || || || |||||||| || Sbjct 196766 AAGGCCAGGCATTAATCCACGTTTTTTTATCCAAAATATGGCAGCGAAGGAACCAGAGAA 196707 Query 16351 GAATATACCTTCAACTGCGGCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttact 16410 || | ||||| || ||||||||||||| | || || | | || || | | Sbjct 196706 AAACACGCCTTCGACCGCGGCAAATGCAATAAGACGTTCCGCAAATGTGAGGTTGTGATC 196647 Query 16411 ttctatccattttttagcccaatttgctttttgtttAACACAGTTCATGTTCTCTATTGC 16470 | ||||| ||||||| ||||| |||| | ||| |||| || || Sbjct 196646 TGAAATCCACCGCAAAGCCCAAGCGGCTTTACGTTTGATCGTCGGGATGGTCTCAATGGC 196587 Query 16471 ATTAAATAAATAAtttttttCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATA 16530 || ||| | || ||| | || || ||| || ||||| || | | ||| Sbjct 196586 ATCAAAAAGATGTGCCCGTTCGTCAGGGTCCTTAACATAGGTGTCTATGAGCAGAGAATA 196527 Query 16531 CATTTCTGAATGAATATTCTCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGA 16590 ||||||| || || |||||||| ||||| || || || |||||||| ||||| | Sbjct 196526 GGTTTCTGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCTCGCTTCCGC 196467 Query 16591 TATTTGTACTTCAGAGTAAAACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGC 16650 | ||| ||||| |||||||||| | | || ||||| || ||||||||| || Sbjct 196466 GACTTGAACTTCGTTTGAAAACCTTTCCACGAGATTCTCGTTCACAATTCCATCGGAGGC 196407 Query 16651 TGCAAAAAACGCAAGTATGTG 16671 || || ||||| ||||| || Sbjct 196406 GGCGAAGAACGCGAGTATTTG 196386 Score = 129 bits (142), Expect = 5e-25 Identities = 287/431 (67%), Gaps = 0/431 (0%) Strand=Plus/Plus Query 16250 TGCAATCCTTCGTCCCTACTTATTAACTCGTTTGAAAATGTAAGACCTGGCATTAGTCCT 16309 |||| ||||| || | ||| || | |||||||||||| |||||||| ||||| || || Sbjct 194060 TGCATGCCTTCATCACGACTGATAAGCTCGTTTGAAAAGGTAAGACCCGGCATGAGGCCG 194119 Query 16310 CGTTTTTTAATCCAAAATATAGCGGCAAATGAACCAGAAAAGAATATACCTTCAACTGCG 16369 || || || ||||| || ||||||||||| || ||||| ||||| ||||| ||||| ||| Sbjct 194120 CGCTTCTTCATCCAGAAGATAGCGGCAAAGGACCCAGAGAAGAAGATACCCTCAACAGCG 194179 Query 16370 GCAAATGCAACCAATCGCTCACCGTACGTTCTAtttttactttctatccattttttagcc 16429 || || || || | || ||| | | || || | ||||| || ||| Sbjct 194180 GCGAAGGCCACAAGACGTTCAGCAAAAGTGGAGCGTTGATCAGAGATCCACTTCAAGGCC 194239 Query 16430 caatttgctttttgtttAACACAGTTCATGTTCTCTATTGCATTAAATAAATAAtttttt 16489 || | ||||| | || | ||| ||| | || || |||| ||| | ||| | Sbjct 194240 CACTCCGCTTTACGCTTGATACAAGGGATGGTGTCAATGGCATCAAAGAGATACTCGCGC 194299 Query 16490 tCTTTGCTATCTAAAATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTC 16549 | | | ||| ||||| ||||| || || | ||| |||| ||||| || || Sbjct 194300 TGTGCGGGATCCTTGATATAGGTATCAATGAGGAGGGAATAGGTTTCGGAATGTATGTTT 194359 Query 16550 TCCATTGCTATCTGAAAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTCAGAGTAA 16609 ||||| || || || ||||| ||||||| |||||| | || |||||| | | Sbjct 194360 TCCATCATAATTTGGAATCCATAGAAGCATCGAGCTTCAGCAGCCTGGACTTCATTGGAG 194419 Query 16610 AACCTTTCTGCTAAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGCAAGTATG 16669 || | ||| | | ||| || || || || |||||| || ||||| || || || | | Sbjct 194420 AAACGTTCCACAAGGTTCTCATTGACAATGCCATCGGAGGCGGCAAAGAAGGCGAGCACG 194479 Query 16670 TGTTTAATAAA 16680 ||| ||| || Sbjct 194480 TGTGAAATGAA 194490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462393729900200