Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq1104 143 3e-29 >seq1104 Length=249415 Score = 143 bits (158), Expect = 3e-29 Identities = 361/546 (66%), Gaps = 6/546 (1%) Strand=Plus/Minus Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640 |||||| || || |||| |||||||| | | || | ||||||||| | || || Sbjct 196823 ACATGCAAAGTCTGTATGCATTCCCTCGTCGCGAGATATGAGCTCGTTAGAATAGGTAAG 196764 Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700 || ||||||| ||||| ||||| | ||||||||||| |||||| || || || || || Sbjct 196763 GCCAGGCATTAATCCACGTTTTTTTATCCAAAATATGGCAGCGAAGGAACCAGAGAAAAA 196704 Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT-- 33758 | ||||| || || ||||| |||||||| | || || | | | ||| || | Sbjct 196703 CACGCCTTCGACCGCGGCAAATGCAATAAGACGTTCCGCAAATGTGAGGTTGTGATCTGA 196644 Query 33759 -ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATT 33817 |||||| ||||||| |||| || ||| | || || || || ||||||| Sbjct 196643 AATCCACCGCAAAGCCCAAGCGGCTTTACGTTTGATCGTCGGGATGGTCTCAATGGCATC 196584 Query 33818 AAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACAT 33877 ||| |||| ||| | | || |||||||| || || || | ||| ||| | Sbjct 196583 AAAAAGATGTGCCCGTTCGTCAGGGTCCTTAACATAGGTGTCTATGAGCAGAGAATAGGT 196524 Query 33878 TTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAAT 33937 ||| || || ||||| || || ||||| || |||||||| ||||| || || | | Sbjct 196523 TTCTGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCTCGCTTCCGCGAC 196464 Query 33938 CTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGC 33997 || ||||| | |||| | ||| | | ||| || ||||| |||||||| ||| || Sbjct 196463 TTGAACTTCGTTTGAAAACCTTTCCACGAGATTCTCGTTCACAATTCCATCGGAGGCGGC 196404 Query 33998 AAAAAACGCCAATACATGTTTTATAAAATATTTTTCGT--CTGGT-GTTAGTTTATTCCA 34054 || ||||| | || || ||||| |||| ||| | || | | |||| Sbjct 196403 GAAGAACGCGAGTATTTGCGAGATAAATCGGCGCTCGTCACTGTTCATTCGATGCGTCCA 196344 Query 34055 ATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTT 34114 || | | || || |||| ||| | |||||| || ||||| || ||||| | || || Sbjct 196343 GTCCATAAGGTCATTGGATAGATCTATTTCTTCAACGGTCCAGAAAGATGCTTGAGCTTT 196284 Query 34115 TTTATA 34120 ||||| Sbjct 196283 CTTATA 196278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629656547766960