Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq1104 109 5e-19 >seq1104 Length=249415 Score = 109 bits (120), Expect = 5e-19 Identities = 359/554 (65%), Gaps = 7/554 (1%) Strand=Plus/Plus Query 13147 CATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGT 13206 || ||| || || || ||||| |||||||| | ||| || |||||||||||||| || Sbjct 194041 CAAACAGGCGAAGTCGGTGTGCATGCCTTCATCACGACTGATAAGCTCGTTTGAAAAGGT 194100 Query 13207 TAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaa 13266 ||||||||||| || || || || || ||||| || ||||| ||||| || || || || Sbjct 194101 AAGACCCGGCATGAGGCCGCGCTTCTTCATCCAGAAGATAGCGGCAAAGGACCCAGAGAA 194160 Query 13267 aaaTATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACT 13326 || || || ||||| || || || || | | | |||| || | || || | Sbjct 194161 GAAGATACCCTCAACAGCGGCGAAGGCCACAAGACGTTCAGCAAAAGTGGAGCGTTGATC 194220 Query 13327 CTCTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTTAACGCAGTTCATATTTTCTATTGC 13386 |||||||| |||||| | ||||| | || | || || | || || || Sbjct 194221 AGAGATCCACTTCAAGGCCCACTCCGCTTTACGCTTGATACAAGGGATGGTGTCAATGGC 194280 Query 13387 GTTAAATAAATAAtttttttCCTTACTG--TCTAAAATATAAGTATCTATCAATAAGCTA 13444 | ||| | ||| | | | | | || ||||| ||||| || | | | | Sbjct 194281 ATCAAAGAGATA--CTCGCGCTGTGCGGGATCCTTGATATAGGTATCAATGAGGAGGGAA 194338 Query 13445 TACATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCT 13504 || |||| ||||| || ||||||||| |||||||| ||||| || |||| ||| || Sbjct 194339 TAGGTTTCGGAATGTATGTTTTCCATCATAATTTGGAATCCATAGAAGCATCGAGCTTCA 194398 Query 13505 GATACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTA 13564 | |||| ||||| | | || | ||| | | ||| || || || || || || Sbjct 194399 GCAGCCTGGACTTCATTGGAGAAACGTTCCACAAGGTTCTCATTGACAATGCCATCGGAG 194458 Query 13565 GCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCGTTTTCTGACA-AC--TTT 13621 || ||||| || || || | ||| ||| || | ||||| || || || || Sbjct 194459 GCGGCAAAGAAGGCGAGCACGTGTGAAATGAAGTGACGCTCGTTGTCGTTCATACGGTTG 194518 Query 13622 AACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACA 13681 |||||| | | ||| || || | || | ||||| ||||||| || || || | Sbjct 194519 GTCCAATCACGCAGATCCTTGGAGAGGTCCATTTCCTCGGCGGTCCAGAAGGATGCCTCG 194578 Query 13682 GCCTTCTTATACAT 13695 || ||||| ||||| Sbjct 194579 GCTTTCTTGTACAT 194592 Score = 104 bits (114), Expect = 2e-17 Identities = 363/560 (65%), Gaps = 9/560 (2%) Strand=Plus/Minus Query 13150 ACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAG 13209 ||||||||| || |||| ||| || || | | ||| |||||||| ||| | || || Sbjct 196823 ACATGCAAAGTCTGTATGCATTCCCTCGTCGCGAGATATGAGCTCGTTAGAATAGGTAAG 196764 Query 13210 ACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaa 13269 || ||||| | || |||||||| ||||||||||| ||||| || ||||| || ||||| Sbjct 196763 GCCAGGCATTAATCCACGTTTTTTTATCCAAAATATGGCAGCGAAGGAACCAGAGAAAAA 196704 Query 13270 TATTCCTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCT- 13328 | ||||| || || ||||| || || | | ||| || | || || | | ||| Sbjct 196703 CACGCCTTCGACCGCGGCAAATGCAATAAGACGTTCCGCAAATGTGAGGTTGTGA-TCTG 196645 Query 13329 CTATCCACTTTCTGGCCCAGTTTGCTTTTTGTTT-AACGCAGTTCATATTTTCTATTGCG 13387 |||||| ||||| ||||| |||| | || | || | || || || Sbjct 196644 AAATCCACCGCAAAGCCCAAGCGGCTTTACGTTTGATCGTCG-GGATGGTCTCAATGGCA 196586 Query 13388 TTAAATAAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATAC 13447 | ||| | || ||| | | ||| || ||| || ||||| | | ||| Sbjct 196585 TCAAAAAGATGTGCCCGTTCGTCAGGGTCCTTAACATAGGTGTCTATGAGCAGAGAATAG 196526 Query 13448 ATTTCTGAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGAT 13507 ||||||| || || || |||||| || ||||| || || || ||||| || || | Sbjct 196525 GTTTCTGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCTCGCTTCCGCG 196466 Query 13508 ACCTGAACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCA 13567 || ||||||||| |||| ||||| | | || ||||| || || || || || Sbjct 196465 ACTTGAACTTCGTTTGAAAACCTTTCCACGAGATTCTCGTTCACAATTCCATCGGAGGCG 196406 Query 13568 GCaaaaaaaGCAAGTATGTGCTTAATAAAttttttttCG----TTTTCTGACAACTTTAA 13623 || || || || ||||| ||| |||||| ||| | ||| | | | Sbjct 196405 GCGAAGAACGCGAGTATTTGCGAGATAAATCGGCGCTCGTCACTGTTCATTCGA-TGCGT 196347 Query 13624 CCAATCTGGAAAATCTTTTGATAAATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGC 13683 ||| || || || || |||| ||||| || ||||||||||| ||||| || ||| Sbjct 196346 CCAGTCCATAAGGTCATTGGATAGATCTATTTCTTCAACGGTCCAGAAAGATGCTTGAGC 196287 Query 13684 CTTCTTATACATCATCCATA 13703 |||||||| | | ||||| Sbjct 196286 TTTCTTATAGAACCGCCATA 196267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430874947602714