Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq221 158 3e-33 seq1104 107 4e-18 >seq221 Length=834679 Score = 158 bits (174), Expect = 3e-33 Identities = 153/197 (78%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || |||||||| || || | ||| ||||| ||||| |||||| Sbjct 212575 GTCGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGACCATCTTCGAGTTGCTTTCCA 212634 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 || || || || | |||||||| ||||| || || || |||||||| |||||||| ||| Sbjct 212635 GCGAAGATGAGACGTTGTTGATCGGGAGGAATACCCTCCTTATCCTGGATCTTTGCCTTT 212694 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 ||||| || | |||||| | || ||||| || ||||||||||| ||||| || || Sbjct 212695 ACATTGTCGATAGTATCGGAGGACTCGACCTCAAGGGTAATAGTCTTGCCAGTGAGAGTC 212754 Query 104543 TTTACAAATATCTGCAT 104559 || ||||| |||||||| Sbjct 212755 TTGACAAAAATCTGCAT 212771 Score = 114 bits (126), Expect = 3e-20 Identities = 140/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428 || |||||||| || ||||| || | || | ||| || || || ||||| ||||| || Sbjct 212353 TCCTTCTGAATGTTGTAGTCGGACAAGGTACGACCATCCTCCAGCTGTTTACCAGCGAAG 212412 Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488 || || | ||| |||||||| || || || || || ||||||||||| || || || || Sbjct 212413 ATAAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTTCACGTTG 212472 Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548 || | |||||| | ||| || || || ||||| ||||| || || || || || || Sbjct 212473 TCGATGGTATCAGACGATTCGACTTCCAGAGTAATCGTCTTGCCCGTGAGGGTCTTGACG 212532 Query 104549 AATATCTGCAT 104559 || |||||||| Sbjct 212533 AAAATCTGCAT 212543 >seq1104 Length=249415 Score = 107 bits (118), Expect = 4e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 || || || |||||||| || ||||| ||||| || ||||| |||||||||||||| ||| Sbjct 194190 GTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCTGGGTCCTTTGCCGCTATCTTCTGG 194131 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 ||||||| | ||||| ||||| || | || || || ||||| | || || | || Sbjct 194130 ATGAAGAAGCGCGGCCTCATGCCGGGTCTTACCTTTTCAAACGAGCTTATCAGTCGTGAT 194071 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGTTT 269286 ||||| | ||| ||||||||| ||||| Sbjct 194070 GAAGGCATGCACACCGACTTCGCCTGTTT 194042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151096612362556