Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq1096 141 1e-29 seq243 136 6e-28 seq386 91.5 2e-14 >seq1096 Length=123042 Score = 141 bits (156), Expect = 1e-29 Identities = 123/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||||||||| ||||| |||||||| ||||| |||||||| ||||||||| |||| Sbjct 96639 AGGTATCACCAAGCCTGCTATTCGTCGTCTTGCTCGCCGTGGTGGTGTCAAGCGTATCTC 96698 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 ||| | | || ||||||| ||||| ||| |||||||| |||||| ||| |||||||| Sbjct 96699 TGGTCTCATTTACGAAGAGACTCGTGGTGTCTTGAAGATTTTCCTCGAGAACGTTATCCG 96758 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACG 16623 |||| | || || || ||||| ||||| || Sbjct 96759 TGATTCGGTCACTTACACTGAGCATGCTAAGCG 96791 >seq243 Length=31337 Score = 136 bits (150), Expect = 6e-28 Identities = 122/153 (80%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||||||||| || || |||||||| ||||| |||||||| ||||||||| |||| Sbjct 242 AGGTATCACCAAGCCTGCCATTCGTCGTCTTGCTCGCCGTGGTGGTGTCAAGCGTATCTC 301 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCA 16590 ||| | | || ||||||| ||||| ||| |||||||| |||||| ||| |||||||| Sbjct 302 TGGTCTCATTTACGAAGAGACTCGTGGTGTCTTGAAGATTTTCCTCGAGAACGTTATCCG 361 Query 16591 TGATGCTTTCCACTATACCGAGCACGCTAAACG 16623 |||| | || || || ||||| ||||| || Sbjct 362 TGATTCGGTCACTTACACTGAGCATGCTAAGCG 394 >seq386 Length=140954 Score = 91.5 bits (100), Expect = 2e-14 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 16471 AGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| || || || || ||||| || || || ||||| |||||||| || |||||| |||| Sbjct 22767 AGGTATTACGAAACCCGCTATTCGCCGGCTTGCTCGACGTGGTGGTGTGAAGCGTATCTC 22708 Query 16531 TGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCT 16575 ||| || ||||||| |||| ||| | |||| | ||||||||||| Sbjct 22707 TGGTCTGATCTATGAGGAGACTCGCGGTGTTCTCAAGATCTTCCT 22663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79056496021701