Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq14430 107 1e-18 seq400 105 4e-18 seq221 105 4e-18 seq478 98.7 7e-16 seq625 91.5 1e-13 >seq14430 Length=305 Score = 107 bits (118), Expect = 1e-18 Identities = 70/77 (91%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||||||||||| |||||||||||||||||||||||||||||||||| | Sbjct 301 CTCTCTTTCCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCTC 242 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 241 GCCAATATTTAGCTTTA 225 >seq400 Length=118247 Score = 105 bits (116), Expect = 4e-18 Identities = 79/93 (85%), Gaps = 5/93 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG-----GGGGTAATCTCGT 25956 |||||| ||||||||||||||||||||||| ||||||||||| | | ||||| || Sbjct 23392 AAGCCCATTCCCTTGGCTGTGGTTTCGCTAAATAGTAGATAGAGACAGTAGAAATCTTGT 23451 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGAC 25989 |||||| |||||||| ||||||| ||||||||| Sbjct 23452 TAATCCATTCATGCGTGTCACTAGTTAGATGAC 23484 Score = 95.1 bits (104), Expect = 8e-15 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 25391 CTCTCTTTCCAAAGTTCTTTTCATCTTTCCCTCACGGTACTTGTTTGCTATTGGTCTCTT 25450 Query 20007 GGTAATATTTAGCCTTA 20023 | |||||||||| ||| Sbjct 25451 GCCAATATTTAGCTTTA 25467 >seq221 Length=834679 Score = 105 bits (116), Expect = 4e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174 || || ||||||||||| ||||| ||||| || ||||| ||| | || || | ||| Sbjct 212341 TGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAAGGTACGACCATCCTCCAGCTGT 212400 Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234 || || || || || ||||| || ||||| | ||||| || || |||||| ||| || Sbjct 212401 TTACCAGCGAAGATAAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTC 212460 Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTTTCAACTTCTAATGTAATAGTTTTACCCGTC 38294 |||||| || | || ||||| ||| ||||| | ||||| || || ||||| Sbjct 212461 GCCTTCACGTTGTCGATGGTATCAGACGATTCGACTTCCAGAGTAATCGTCTTGCCCGTG 212520 Query 38295 AAGGTTTTCACGAATATCTGCAT 38317 | ||| || ||||| |||||||| Sbjct 212521 AGGGTCTTGACGAAAATCTGCAT 212543 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148 ||||||| | || ||| | ||||| || ||||| |||||| || || ||||| |||| Sbjct 212543 TACCACCACGCAGACGAAGGACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAG 212602 Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208 | | || | || || | ||| ||||| || || || || ||||||||||||| | Sbjct 212603 AAAGGGTGCGACCATCTTCGAGTTGCTTTCCAGCGAAGATGAGACGTTGTTGATCGGGAG 212662 Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268 | | || || || ||| || ||| ||| ||||| | || |||||| || | Sbjct 212663 GAATACCCTCCTTATCCTGGATCTTTGCCTTTACATTGTCGATAGTATCGGAGGACTCGA 212722 Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 | || | |||||||| || || || | || || || || |||||||| Sbjct 212723 CCTCAAGGGTAATAGTCTTGCCAGTGAGAGTCTTGACAAAAATCTGCAT 212771 >seq478 Length=95821 Score = 98.7 bits (108), Expect = 7e-16 Identities = 77/92 (84%), Gaps = 5/92 (5%) Strand=Plus/Minus Query 25905 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAG-----GGGGTAATCTCGTTAA 25959 ||| ||||||||||||||||||| ||||||||||||||| | || ||||| ||||| Sbjct 67605 CCCATTCCCTTGGCTGTGGTTTCACTAGATAGTAGATAGAGACAGTGGGAATCTTGTTAA 67546 Query 25960 TCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 ||| |||||| || ||| ||||||||||| || Sbjct 67545 TCCATTCATGTGCATCATTAATTAGATGATGA 67514 Score = 89.7 bits (98), Expect = 3e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006 |||||| | |||||||||||||| |||||||||| |||||||||| |||||| ||||| | Sbjct 62509 CTCTCTTTCCAAAGTTCTTTTCATCTTTCCCTCATGGTACTTGTTTGCTATCAGTCTCTC 62450 Query 20007 GGTAATATTTAGCCTTA 20023 |||||||||| ||| Sbjct 62449 ACCAATATTTAGCTTTA 62433 >seq625 Length=152664 Score = 91.5 bits (100), Expect = 1e-13 Identities = 115/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 6240 GAGGGTAAGGGAAACGGTATTAAAACCGTCATTGTCAACATGCCTGAAGTCGCTAAGGCG 6299 |||||||| |||||||| || ||||||||| || || ||| | || || || ||| Sbjct 34989 GAGGGTAAAGGAAACGGCATCAAAACCGTCGTTCCTAATATGTCAGATGTAGCCCGCGCG 35048 Query 6300 CTCGGACGCCCTGCCACCTACCCGACGAAATATTTCGGGTGCGAACTTGGCGCTCAGACG 6359 ||| | || ||| | | ||||| || |||| || || || |||||||| || || || Sbjct 35049 CTCAGCCGTCCTCCTGCATACCCCACCAAATTCTTTGGCTGTGAACTTGGTGCACAAACT 35108 Query 6360 CAGTTTGATCACAAAAACGAGCGCTTCATCGTTAACGG 6397 || ||| | |||||||| |||| ||||||||||| Sbjct 35109 TCATTCGATGAGAAAAACGACCGCTATATCGTTAACGG 35146 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334863691068767