Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq1104 125 9e-24 >seq1104 Length=249415 Score = 125 bits (138), Expect = 9e-24 Identities = 344/524 (66%), Gaps = 6/524 (1%) Strand=Plus/Minus Query 32682 CCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTT 32741 |||||||| | | || | ||||| ||| | || || || ||||||| ||||| ||| Sbjct 196801 CCCTCGTCGCGAGATATGAGCTCGTTAGAATAGGTAAGGCCAGGCATTAATCCACGTTTT 196742 Query 32742 TTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAG 32801 || | ||||||||||| || || || ||||| || || | ||||| || || ||||| Sbjct 196741 TTTATCCAAAATATGGCAGCGAAGGAACCAGAGAAAAACACGCCTTCGACCGCGGCAAAT 196682 Query 32802 GCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT---ATCCACTTTTGAGCCCAATCG 32858 |||||||| | || || | | | ||| || | |||||| ||||||| || Sbjct 196681 GCAATAAGACGTTCCGCAAATGTGAGGTTGTGATCTGAAATCCACCGCAAAGCCCAAGCG 196622 Query 32859 GCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTA 32918 || || ||| | || || ||||| || |||| ||| |||| ||| | | Sbjct 196621 GCTTTACGTTTGATCGTCGGGATGGTCTCAATGGCATCAAAAAGATGTGCCCGTTCGTCA 196562 Query 32919 CTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATG 32978 || |||||||| || || || | ||| ||| |||| || || ||||| || || Sbjct 196561 GGGTCCTTAACATAGGTGTCTATGAGCAGAGAATAGGTTTCTGAGTGGATGTTCTCCATC 196502 Query 32979 GCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGT 33038 || || || |||||||||||||| || || | | || ||||| | |||| | | Sbjct 196501 ATGATCTGGAAGCCGTAGAAGCATCTCGCTTCCGCGACTTGAACTTCGTTTGAAAACCTT 196442 Query 33039 TCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTT 33098 || | | ||| || ||||| ||||| || ||| || || ||||| | || || Sbjct 196441 TCCACGAGATTCTCGTTCACAATTCCATCGGAGGCGGCGAAGAACGCGAGTATTTGCGAG 196382 Query 33099 ATAAAATATTTTTCGT--CTGGT-GTTAGTTTATTCCAATCATTGATATCTTTAGATATA 33155 ||||| |||| ||| | || | | |||| || | | || || |||| | Sbjct 196381 ATAAATCGGCGCTCGTCACTGTTCATTCGATGCGTCCAGTCCATAAGGTCATTGGATAGA 196322 Query 33156 TCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATA 33199 || | |||||| || ||||| || ||||| | || || ||||| Sbjct 196321 TCTATTTCTTCAACGGTCCAGAAAGATGCTTGAGCTTTCTTATA 196278 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633469972377200