Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1104 107 4e-18 >seq1104 Length=249415 Score = 107 bits (118), Expect = 4e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621 |||||||| ||||| |||| || ||| | |||||||| ||||| || || ||||| | Sbjct 193883 CTTATTGGAATGAATGCTGATCTGATGTGTCAGTACATTGAATTTGTGGCTGACCGTCTC 193824 Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681 || | | |||||| ||||||| || || || | |||||||| | ||| ||||| Sbjct 193823 CTCGTATCTCTTGGTAATGAGAAGGTCTATGACAAGACCAACCCCTTCGACTTCATGGAC 193764 Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 | ||||| ||||| || || || ||||||||||| ||||| || Sbjct 193763 ATGATTTCCCTTCAGGGTAAGACCAACTTCTTCGAGAAGCGCGT 193720 Score = 91.5 bits (100), Expect = 3e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 243561 GCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 243620 |||||| ||||||||||| | || ||| | || ||||| || ||||| || ||||| | Sbjct 196984 GCTTATCGGCATGAACTCCAAGCTAATGCGTCAATACATTGAGTTCGTCGCTGACCGTCT 197043 Query 243621 TTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGA 243680 | | | ||||| | |||||| ||| || ||| || ||||| | || ||||| Sbjct 197044 ACTTGTATCTCTTGGCAACGAGAAACATTACGACGCCACCAATCCCTTCGATTTCATGGA 197103 Query 243681 GCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGT 243725 | || ||||| ||||| ||| | |||||||||||||| || || Sbjct 197104 AATGATCTCGCTACAAGGAAAAGCCAACTTCTTCGAAAAACGCGT 197148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102590929292950