Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq708 136 2e-26 seq221 107 8e-18 seq1387 93.3 2e-13 >seq708 Length=254718 Score = 136 bits (150), Expect = 2e-26 Identities = 250/364 (69%), Gaps = 7/364 (2%) Strand=Plus/Minus Query 451244 CCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATT 451303 ||||| || ||||| || ||||| | || || |||| || || || || || || Sbjct 93604 CCTGAGGAGATTTCCTCCATGGTCTTGACCAAGATGAGGGAGACTGCCGAGTCTTACCTT 93545 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || || | | |||| || | |||||||||||||||||||||||| | ||||| Sbjct 93544 GGCACTTCCATCCAAAATGCCGTTGTCACTGTTCCCGCTTATTTCAATGATTCCCAACGT 93485 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || || || ||||| || ||| || |||||| | || ||||| || || || ||||| Sbjct 93484 CAGGCTACCAAAGACGCTGGAACCATCGCTGGTCTCAACGTTCTCCGTATAATCAATGAG 93425 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT 451483 || || || |||||| | || || || || | || || | || | || ||| Sbjct 93424 CCCACTGCTGCTGCTATCGCCTACGGTCTCGACAA---GAAGGTCACTGGCGAGCGCAAT 93368 Query 451484 ATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGAT 451543 | | | |||||| |||||||||||||| ||| ||| | | | |||||||| Sbjct 93367 GTCCTCATCTTTGATCTTGGTGGAGGAACTTTCGATGTCTCTCTTTTGACCATTGAAGA- 93309 Query 451544 GGGGTATTT--GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601 |||||||| || || ||||| || |||||| || ||||| || ||||||||| ||| Sbjct 93308 -GGGTATTTTCGAGGTTAAGGCCACTGCTGGTGACACCCATCTTGGCGGTGAAGATTTTG 93250 Query 451602 ATAA 451605 | || Sbjct 93249 ACAA 93246 >seq221 Length=834679 Score = 107 bits (118), Expect = 8e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | ||||| || || || || ||||| || |||||||| ||||| || || || || Sbjct 212771 ATGCAGATTTTTGTCAAGACTCTCACTGGCAAGACTATTACCCTTGAGGTCGAGTCCTCC 212712 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| || || | | || ||| || || |||||||| || |||||||| |||||| Sbjct 212711 GATACTATCGACAATGTAAAGGCAAAGATCCAGGATAAGGAGGGTATTCCTCCCGATCAA 212652 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | || ||| | || || ||||| |||||||| | || | | || || || Sbjct 212651 CAACGTCTCATCTTCGCTGGAAAGCAACTCGAAGATGGTCGCACCCTTTCTGACTACAAC 212592 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || ||||| || Sbjct 212591 ATCCAGAAGGAGTCGACTCTCCACTTGGT 212563 >seq1387 Length=489501 Score = 93.3 bits (102), Expect = 2e-13 Identities = 190/279 (68%), Gaps = 9/279 (3%) Strand=Plus/Minus Query 451333 TGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGC 451392 ||| |||||||||||||| || | || || | || || || ||||| || |||||| Sbjct 158275 TGTCCCCGCTTATTTCAACGACTCGCAGCGTCTCGCTACCAAGGATGCCGGTACTATTGC 158216 Query 451393 TGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACT 451452 |||| | | ||||| || ||||| || || ||||| || |||||| | || ||||| || Sbjct 158215 TGGTCTTGACGTTCTCCGTATTATCAACGAGCCTACCGCTGCTGCTATTGCCTATGGTCT 158156 Query 451453 AG---GAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGG 451509 | | ||||||| | | | |||| || | || |||| ||| |||| ||||| Sbjct 158155 TGACCGCCAATCAAAGG---CTG-AGAAGAACGTCCTT--ATATTCGATCTTGGAGGAGG 158102 Query 451510 AACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAA 451569 ||| ||| ||| | || ||| | | ||||| || | || || || || Sbjct 158101 AACCTTCGATGTTTCGCTCCTCAACATTAACGGCGGGGTTTTCGCTGTGAAAGCTACTGC 158042 Query 451570 TGGTGATACTCATCTAGGAGGTGAAGATATTGATAATGC 451608 |||||||||||| || || || || ||| | || ||||| Sbjct 158041 TGGTGATACTCACCTTGGTGGCGAGGATTTCGACAATGC 158003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975200553711356