Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1104 120 4e-21 seq221 87.8 2e-11 >seq1104 Length=249415 Score = 120 bits (132), Expect = 4e-21 Identities = 200/288 (69%), Gaps = 11/288 (4%) Strand=Plus/Plus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 ||||| || |||||||| | ||||| ||||| || || |||||||||||||||||| Sbjct 194066 CCTTCATCACGACTGATAAGCTCGTTTGAAAAGGTAAGACCCGGCATGAGGCCGCGCTTC 194125 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || | ||| ||||| ||| || || ||||| ||||| ||||| || ||||| ||| Sbjct 194126 TTCATCCAGAAGATAGCGGCAAAGGACCCAGAGAAGAAGATACCCTCAACAGCGGCGAAG 194185 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTT----GATCCACTTCATCGC 869355 | | || || || ||||| ||| ||| | ||| | ||||||||||| || Sbjct 194186 GCCACAAGACGTTCAGCAAAAGTG--GAG-----CGTTGATCAGAGATCCACTTCAAGGC 194238 Query 869356 CCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTT 869415 ||| || || || | | | | || | ||||| ||||| |||||| | || Sbjct 194239 CCACTCCGCTTTACGCTTGATACAAGGGATGGTGTCAATGGCATCAAAGAGATACTCGCG 194298 Query 869416 TTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 | || || ||||||| |||||| || || ||||| |||||||| || Sbjct 194299 CTGTGCGGGATCCTTGATATAGGTATCAATGAGGAGGGAATAGGTTTC 194346 Score = 93.3 bits (102), Expect = 5e-13 Identities = 134/189 (71%), Gaps = 0/189 (0%) Strand=Plus/Plus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 ||||| ||||| ||| ||| ||||||| |||||| ||||||||||| |||| || Sbjct 193695 GACGTTGGCCTTTTGGTAGTCGGACACGCGCTTCTCGAAGAAGTTGGTCTTACCCTGAAG 193754 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAG 868803 || |||| ||||| | ||| ||||||| | | | ||| ||| || || || Sbjct 193755 GGAAATCATGTCCATGAAGTCGAAGGGGTTGGTCTTGTCATAGACCTTCTCATTACCAAG 193814 Query 868804 CGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCAT 868863 || |||| || ||||| || ||||| || |||||||| ||||| || | || ||||| Sbjct 193815 AGATACGAGGAGACGGTCAGCCACAAATTCAATGTACTGACACATCAGATCAGCATTCAT 193874 Query 868864 GCCGATGAG 868872 || || || Sbjct 193875 TCCAATAAG 193883 Score = 93.3 bits (102), Expect = 5e-13 Identities = 197/292 (67%), Gaps = 3/292 (1%) Strand=Plus/Minus Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231 ||||| || ||||||||| || | ||||| | ||| ||||| ||||| | | Sbjct 196809 TATGCATTCCCTCGTCGCGAGATATGAGCTCGTTAGAATAGGTAAGGCCAGGCATTAATC 196750 Query 869232 CGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGG 869291 | || || || | |||||| ||||| ||| || |||||||| | ||| ||||| | Sbjct 196749 CACGTTTTTTTATCCAAAATATGGCAGCGAAGGAACCAGAGAAAAACACGCCTTCGACCG 196690 Query 869292 CGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTCA 869351 ||||||| | || || || || ||||| ||| | | || || |||||| || Sbjct 196689 CGGCAAATGCAATAAGACGTTCCGCAAATGTGAGGTTGTGATC--TGAA-ATCCACCGCA 196633 Query 869352 TCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGT 869411 ||||| |||| || | | || ||| | || || ||||| ||| || || Sbjct 196632 AAGCCCAAGCGGCTTTACGTTTGATCGTCGGGATGGTCTCAATGGCATCAAAAAGATGTG 196573 Query 869412 CCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || |||| | |||||||| ||||||||||| || || || |||||||| || Sbjct 196572 CCCGTTCGTCAGGGTCCTTAACATAGGTGTCTATGAGCAGAGAATAGGTTTC 196521 Score = 86.0 bits (94), Expect = 8e-11 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || ||||||||||||||| ||| ||| | || || ||||| Sbjct 196519 GAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCATCTCGCTTCCGCGACTTGA 196460 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || || |||| | | || |||||| ||| || || ||| ||||||||| Sbjct 196459 ACTTCGTTTGAAAACCTTTCCACGAGATTCTCGTTCACAATTCCATCGGAGGCGGCGAAG 196400 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTC 869787 || || || | ||| |||||| |||||||||| Sbjct 196399 AACGCGAGTATTTGCGAGATAAATCGGCGCTCGTC 196365 >seq221 Length=834679 Score = 87.8 bits (96), Expect = 2e-11 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 19052 CATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTG 19111 |||||||||||| || || || ||| |||||||| || ||||| ||||| || || Sbjct 87134 CATCGGCGGCACTGTCACTTGTGTGATCCGCAACGTCCCCGCAGGTCTCGGTGAACCTGT 87193 Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171 || |||||| | || ||| | | || || ||||| |||||||| ||||| |||| Sbjct 87194 ATTCGACAAGTTTGAAGCCAAATTGGGTCATGCGATGCTTTCGATCCCCGCCACGAAGGC 87253 Query 19172 ATTCGAGATTGGC 19184 |||||||||||| Sbjct 87254 TTTCGAGATTGGC 87266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105460402779869