Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1104 143 4e-28 >seq1104 Length=249415 Score = 143 bits (158), Expect = 4e-28 Identities = 233/333 (70%), Gaps = 17/333 (5%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||| || |||||||| | ||||| |||| || || |||||||||||||||||| Sbjct 194066 CCTTCATCACGACTGATAAGCTCGTTTGAAAAGGTAAGACCCGGCATGAGGCCGCGCTTC 194125 Query 794401 TTGAGCCAAAAGAT---GGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCA 794457 || | ||| ||||| |||| || | || ||||| ||||| ||||| || ||||| Sbjct 194126 TTCATCCAGAAGATAGCGGCAAAGGA---CCCAGAGAAGAAGATACCCTCAACAGCGGCG 194182 Query 794458 AAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTT----GATCCACTTCAT 794513 ||| | || || || || ||||||||| || | ||| | ||||||||||| Sbjct 194183 AAGGCCACAAGACGTTCAGCAAAAGTG--GAG-----CGTTGATCAGAGATCCACTTCAA 194235 Query 794514 CGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTC 794573 |||||||| || || | | | | || | ||||| ||||| |||||| | || Sbjct 194236 GGCCCACTCCGCTTTACGCTTGATACAAGGGATGGTGTCAATGGCATCAAAGAGATACTC 194295 Query 794574 CTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGAT 794633 || | || ||||||| ||||| || |||||||| || ||||| || || || || Sbjct 194296 GCGCTGTGCGGGATCCTTGATATAGGTATCAATGAGGAGGGAATAGGTTTCGGAATGTAT 194355 Query 794634 GTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 |||||| || || ||||| ||||| ||||| Sbjct 194356 GTTTTCCATCATAATTTGGAATCCATAGAAGCA 194388 Score = 113 bits (124), Expect = 7e-19 Identities = 221/326 (68%), Gaps = 3/326 (1%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || ||||||||| || | ||||| | || ||||| ||||| | || || || Sbjct 196801 CCCTCGTCGCGAGATATGAGCTCGTTAGAATAGGTAAGGCCAGGCATTAATCCACGTTTT 196742 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || | |||||| |||||| ||| || |||||||| | ||| ||||| |||||||| Sbjct 196741 TTTATCCAAAATATGGCAGCGAAGGAACCAGAGAAAAACACGCCTTCGACCGCGGCAAAT 196682 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 | | || || || ||||| ||| ||| | | |||||| || ||||| Sbjct 196681 GCAATAAGACGTTCCGCAAATGTG---AGGTTGTGATCTGAAATCCACCGCAAAGCCCAA 196625 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 | || || | | || || | || || ||||| ||| || || || ||| Sbjct 196624 GCGGCTTTACGTTTGATCGTCGGGATGGTCTCAATGGCATCAAAAAGATGTGCCCGTTCG 196565 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 | |||||||| || |||||||| ||||| || || ||||| |||||||||||||| || Sbjct 196564 TCAGGGTCCTTAACATAGGTGTCTATGAGCAGAGAATAGGTTTCTGAGTGGATGTTCTCC 196505 Query 794641 ATGGCGATCTGGAAGCCATAAAAGCA 794666 || |||||||||||| || ||||| Sbjct 196504 ATCATGATCTGGAAGCCGTAGAAGCA 196479 Score = 91.5 bits (100), Expect = 2e-12 Identities = 133/186 (72%), Gaps = 4/186 (2%) Strand=Plus/Minus Query 793899 GCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 793958 ||||| ||||| || ||||| ||||| ||||||| || || | ||||||||| Sbjct 197166 GCCTTTGCATAATCCGATACGCGTTTTTCGAAGAAGTTGGCTTTTCCTTGTAGCGAGATC 197107 Query 793959 AACTCCATCCACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCTCGCACCCGAGCGACG 794016 | ||||| | ||| || |||| |||| ||| || |||||| || || || Sbjct 197106 ATTTCCATGAAATCGAAGGGATTGGTGGCGTC--GTAATGTTTCTCGTTGCCAAGAGATA 197049 Query 794017 CAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGA 794076 |||| || ||||| |||||||| |||||||| || | ||| || || ||||||||||| Sbjct 197048 CAAGTAGACGGTCAGCGACGAACTCAATGTATTGACGCATTAGCTTGGAGTTCATGCCGA 196989 Query 794077 TGAGCG 794082 | |||| Sbjct 196988 TAAGCG 196983 Score = 89.7 bits (98), Expect = 8e-12 Identities = 126/175 (72%), Gaps = 4/175 (2%) Strand=Plus/Plus Query 793908 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 793967 || ||| ||||||| |||||| ||||||||||| |||| || || |||| ||||| Sbjct 193711 TAGTCGGACACGCGCTTCTCGAAGAAGTTGGTCTTACCCTGAAGGGAAATCATGTCCATG 193770 Query 793968 CACGGGAACGGGTTGGCC--GTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGC 794025 | ||| ||||||| | |||| ||| |||||| || || || | || || | Sbjct 193771 AAGTCGAAGGGGTTGGTCTTGTCA--TAGACCTTCTCATTACCAAGAGATACGAGGAGAC 193828 Query 794026 GGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAG 794080 |||| || || |||||||||||||| ||||| || | || ||||| || || || Sbjct 193829 GGTCAGCCACAAATTCAATGTACTGACACATCAGATCAGCATTCATTCCAATAAG 193883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7914070295605623