Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq708 129 4e-24 seq1387 93.3 3e-13 seq3940 86.0 5e-11 >seq708 Length=254718 Score = 129 bits (142), Expect = 4e-24 Identities = 201/286 (70%), Gaps = 6/286 (2%) Strand=Plus/Plus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || |||||||||||||| || | | || | || | || || | || | ||||| Sbjct 93246 TTGTCAAAATCTTCACCGCCAAGATGGGTGTCACCAGCAGTGGCCTTAACCTCGAAAATA 93305 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || ||||||| | |||||||| ||||| ||||| ||||| | |||||| || || Sbjct 93306 CCCTCTTCAATGGTCAAAAGAGAGACATCGAAAGTTCCTCCACCAAGATCAAAGATGAGG 93365 Query 282311 ACATTCATTTCTT---TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 282367 ||||| || || | | | || || ||||| || || | |||||||||||| Sbjct 93366 ACATTGCGCTCGCCAGTGACCT---TCTTGTCGAGACCGTAGGCGATAGCAGCAGCAGTG 93422 Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 || ||||| || || | | ||| || |||||||| || |||| || ||||| || || Sbjct 93423 GGCTCATTGATTATACGGAGAACGTTGAGACCAGCGATGGTTCCAGCGTCTTTGGTAGCC 93482 Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 || | ||| ||||| || ||||| || |||||||| | |||||||| Sbjct 93483 TGACGTTGGGAATCATTGAAATAAGCGGGAACAGTGACAACGGCAT 93528 >seq1387 Length=489501 Score = 93.3 bits (102), Expect = 3e-13 Identities = 135/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 282274 AACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT 282333 |||||| |||||| || || | ||| || ||||| || ||| |||| | ||| | | Sbjct 158089 AACATCGAAGGTTCCTCCTCCAAGATCGAATATAAGGACGTTC--TTCTCAGCCTTTGAT 158146 Query 282334 TTTA--TCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 | ||||||||||| |||| ||||||||| || || || || ||||| | | ||| Sbjct 158147 TGGCGGTCAAGACCATAGGCAATAGCAGCAGCGGTAGGCTCGTTGATAATACGGAGAACG 158206 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 | |||||||||||| | || ||||| || || || | | || || ||||| ||||| Sbjct 158207 TCAAGACCAGCAATAGTACCGGCATCCTTGGTAGCGAGACGCTGCGAGTCGTTGAAATAA 158266 Query 282452 GCAGGAACA 282460 || || ||| Sbjct 158267 GCGGGGACA 158275 >seq3940 Length=2857 Score = 86.0 bits (94), Expect = 5e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 435133 GAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAACT 435192 ||||| |||||||| | |||||||||||||||||| ||||| ||| | || || ||| Sbjct 2702 GAATTCTTCTTCCATGCTATGGCTGGTCGTGAAGGTCTTATTGGTACTGTCATCAAGACT 2643 Query 435193 GCTGATACTGGTTATATTCA 435212 ||||| |||||||||||||| Sbjct 2642 GCTGAGACTGGTTATATTCA 2623 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3739626047751282