Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1104 187 4e-41 >seq1104 Length=249415 Score = 187 bits (206), Expect = 4e-41 Identities = 373/545 (68%), Gaps = 17/545 (3%) Strand=Plus/Minus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| |||||||| | |||| ||||||| ||||| |||||||||||||| | |||| Sbjct 194602 GATCTGGCAAATGTACAAGAAAG-CCGAGGCATCCTTCTGGACCGCCGAGGAAATGGACC 194544 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGTCGC---TGAGCGACGACGAGCGCCATTTCATCA 1455891 || | || | | ||| | ||| |||| ||||||| || ||||| Sbjct 194543 TCTCCAAGGATCTGCGTGATTGGACCAACCGTATGAACGACAACGAGCGTCACTTCATTT 194484 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 ||||| |||||||| ||| |||||| ||||||||| || |||||||| | | Sbjct 194483 CACACGTGCTCGCCTTCTTT-GCCGCCTCCGATGGCATTGTCAATGAGAACCTTGTGGAA 194425 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || || || ||||| | || || || | || || || ||||| || Sbjct 194424 CGTTTCTCCAATGAAGTCCAGGCTGCTGAAGCTCGATGCTTCTATGGATTCCAAATTATG 194365 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || |||||||| || || |||||||| || ||||| || || ||||| ||||||| || Sbjct 194364 ATGGAAAACATACATTCCGAAACCTATTCCCTCCTCATTGATACCTATATCAAGGATCCC 194305 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 | || || | |||||| ||||| ||||| | || | | | | || || Sbjct 194304 GCACAGCGCGAGTATCTCTTTGATGCCATTGACACCATCCCTTGTATCAAGCGTAAAGCG 194245 Query 1456132 GACTGGGCGATGAAGTGGATC----AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTC 1456187 || ||||| ||||||||||| | ||| | ||| || ||||| || || || Sbjct 194244 GAGTGGGCCTTGAAGTGGATCTCTGATCAACG-----CTCCACT-TTTGCTGAACGTCTT 194191 Query 1456188 GTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGG 1456246 || | ||| ||||| || ||||| ||||| ||||| || || ||| ||||| ||| Sbjct 194190 GTGGCCTTCGCCGCTGTTGAGGGTATCTTCTTCTCTGGGTCCTTTGCCGCTATCTTCTGG 194131 Query 1456247 CTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCGA 1456306 | |||||||||||||||||||| |||||| |||| ||||| |||||||||| || Sbjct 194130 ATGAAGAAGCGCGGCCTCATGCCGGGTCTT-ACCTTTTCAAACGAGCTTATCAGTCGTGA 194072 Query 1456307 CGAAG 1456311 |||| Sbjct 194071 TGAAG 194067 Score = 125 bits (138), Expect = 1e-22 Identities = 274/405 (68%), Gaps = 4/405 (1%) Strand=Plus/Plus Query 1455873 GACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGT 1455932 |||||||||| || ||| ||| | ||||| || || ||||||| |||||| || || Sbjct 196365 GACGAGCGCCGATTTATCTCGCAAATACTCGCGTTCTT-CGCCGCCTCCGATGGAATTGT 196423 Query 1455933 GGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTT 1455992 | |||||| || | | | ||| || || || ||| | | || || | | || Sbjct 196424 GAACGAGAATCTCGTGGAAAGGTTTTCAAACGAAGTTCAAGTCGCGGAAGCGAGATGCTT 196483 Query 1455993 TTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGA 1456052 ||||| ||||||||| || || ||||||||||| |||||||| || || || || || Sbjct 196484 CTACGGCTTCCAGATCATGATGGAGAACATCCACTCAGAAACCTATTCTCTGCTCATAGA 196543 Query 1456053 CACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCC 1456112 |||||| || |||||||| | ||| || || || ||| ||||| || || | || Sbjct 196544 CACCTATGTTAAGGACCCTGACGAACGGGCACATCTTTTTGATGCCATTGAGACCATCCC 196603 Query 1456113 GTCGGTGAGGAAAAAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACAC 1456172 | || | | || |||| ||||| || |||||| | | |||| ||| Sbjct 196604 GACGATCAAACGTAAAGCCGCTTGGGCTTTGCGGTGGATTTCAGATCACAACCTC-ACA- 196661 Query 1456173 TTTGCCGAGCGGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTC 1456231 ||||| || || || | | |||||||| ||||| ||| | |||||||| || ||| Sbjct 196662 TTTGCGGAACGTCTTATTGCATTTGCCGCGGTCGAAGGCGTGTTTTTCTCTGGTTCCTTC 196721 Query 1456232 TGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT 1456276 ||||| |||||| | || || || || | ||||| || ||| Sbjct 196722 GCTGCCATATTTTGGATAAAAAAACGTGGATTAATGCCTGGCCTT 196766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7175838084750034