Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1104 156 6e-33 >seq1104 Length=249415 Score = 156 bits (172), Expect = 6e-33 Identities = 269/388 (69%), Gaps = 7/388 (2%) Strand=Plus/Minus Query 39659 TCGTTAGAAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCA 39718 ||||||||| | || || |||||||||| ||||| ||||| | ||||||||||||||| Sbjct 196780 TCGTTAGAATAGGTAAGGCCAGGCATTAATCCACGTTTTTTTATCCAAAATATGGCAGCG 196721 Query 39719 AAAGATCCAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAA 39778 || || ||||| || || | |||||| || || |||||||||| ||| | |||| || Sbjct 196720 AAGGAACCAGAGAAAAACACGCCTTCGACCGCGGCAAATGCAATAAG--ACGTTCCGCAA 196663 Query 39779 CT-TG----TATCATTATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAG 39833 | || | | || |||||| | |||||| | ||||| || | | Sbjct 196662 ATGTGAGGTTGTGATCTGAAATCCACCGCAAAGCCCAAGCGGCTTTACGTTTGATCGTCG 196603 Query 39834 GCATTGTTTCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTAT 39893 | || || || || |||| ||| |||| ||| ||| || |||||||| || | Sbjct 196602 GGATGGTCTCAATGGCATCAAAAAGATGTGCCCGTTCGTCAGGGTCCTTAACATAGGTGT 196543 Query 39894 CTATTAACAGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAA 39953 |||| | |||| ||| ||||||| |||||||| || ||| ||||| || ||||| | Sbjct 196542 CTATGAGCAGAGAATAGGTTTCTGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAGA 196483 Query 39954 AACATCTTGCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCA 40013 | ||||| ||||| | | ||| || || |||| |||||| | | ||| || |||| Sbjct 196482 AGCATCTCGCTTCCGCGACTTGAACTTCGTTTGAAAACCTTTCCACGAGATTCTCGTTCA 196423 Query 40014 CTATTCCATCACTAGCGGCAAAAAATGC 40041 | |||||||| ||||| || || || Sbjct 196422 CAATTCCATCGGAGGCGGCGAAGAACGC 196395 Score = 149 bits (164), Expect = 9e-31 Identities = 372/562 (66%), Gaps = 10/562 (2%) Strand=Plus/Plus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 || ||||||||||| || | ||| ||||| | ||| || | ||||| ||||| || Sbjct 194042 AAACAGGCGAAGTCGGTGTGCATGCCTTCATCACGACTGATAAGCTCGTTTGAAAAGGTA 194101 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733 || || ||||| || || ||||| || | ||| || || || ||||| || ||||| ||| Sbjct 194102 AGACCCGGCATGAGGCCGCGCTTCTTCATCCAGAAGATAGCGGCAAAGGACCCAGAGAAG 194161 Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTG---TATCATTA 39790 ||||| || || || || || || || ||||| | || | || | | | || | Sbjct 194162 AAGATACCCTCAACAGCGGCGAAGGCCACAAGACGTTCAGCAAAAGTGGAGCGTTGATCA 194221 Query 39791 TGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTTTCTATAGCA 39850 ||||||||| ||||| || ||||| ||| | |||||| || || || || ||| Sbjct 194222 GAGATCCACTTCAAGGCCCACTCCGCTTTACGCTTGATACAAGGGATGGTGTCAATGGCA 194281 Query 39851 TTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATAC 39910 | ||||||||| | | | ||| || | ||| ||||| || | || ||| Sbjct 194282 TCAAAGAGATACTCGCGCTGTGCGGGATCCTTGATATAGGTATCAATGAGGAGGGAATAG 194341 Query 39911 ATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTA 39970 |||| ||||| |||||||| ||| || || ||||| || || |||| ||||||| | Sbjct 194342 GTTTCGGAATGTATGTTTTCCATCATAATTTGGAATCCATAGAAGCATCGAGCTTCAGCA 194401 Query 39971 ATTTGTACCTC--TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAG 40028 || || || || | ||| | |||| | | || ||||| || || ||||| | Sbjct 194402 GCCTGGACTTCATTGGAGAAA--CGTTCCACAAGGTTCTCATTGACAATGCCATCGGAGG 194459 Query 40029 CGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCA---ATTTAT 40085 ||||||| || || | || ||| ||| || | || | | ||| || Sbjct 194460 CGGCAAAGAAGGCGAGCACGTGTGAAATGAAGTGACGCTCGTTGTCGTTCATACGGTTGG 194519 Query 40086 TCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTG 40145 |||| ||| | ||| || || | || | ||| || || ||||| || || ||||| | Sbjct 194520 TCCAATCACGCAGATCCTTGGAGAGGTCCATTTCCTCGGCGGTCCAGAAGGATGCCTCGG 194579 Query 40146 CCTTTTTGTACATGTTCCATAT 40167 | || |||||||| | ||| || Sbjct 194580 CTTTCTTGTACATTTGCCAGAT 194601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686733148833480