Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq1104 134 1e-26 >seq1104 Length=249415 Score = 134 bits (148), Expect = 1e-26 Identities = 375/565 (66%), Gaps = 14/565 (2%) Strand=Plus/Minus Query 43730 ATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTGATTTG 43789 || |||||||||||||| ||||| |||| || || ||||| || || ||| | || | Sbjct 194601 ATCTGGCAAATGTACAAGAAAGCCGAGGCATCCTTCTGGACCGCCGAGGAAATGGACCTC 194542 Query 43790 ACTAAAGACTTAGCACATTGGATTG--CATTAAAACCACAA-GAAAAACATTTTATATCT 43846 | || || | |||||| | | ||| |||| || || || || || Sbjct 194541 TCCAAGGATCTGCGTGATTGGACCAACCGTATGAACGACAACGAGCGTCACTTCATTTCA 194482 Query 43847 TTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGG 43906 || | || || ||||| || ||| || || |||||||| || | || || Sbjct 194481 CACGTGCTCGCCTTCTTTGCCGCCTCCGATGGCATTGTCAATGAGAACCTTGTGGAACGT 194422 Query 43907 TTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATA 43966 || | | ||||| || | ||||| ||||| || ||||| || |||||| || Sbjct 194421 TTCTCCAATGAAGTCCAGGCTGCTGAAGCTCGATGCTTCTATGGATTCCAAATTATGATG 194362 Query 43967 GAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGATGG-GCA 44025 ||||| || ||||| |||| || || || || ||||| || ||||| ||| ||| Sbjct 194361 GAAAACATACATTCCGAAACCTATTCCCTCCTCATTGATACCTATATCAAGGATCCCGCA 194302 Query 44026 C-GAGA-AGCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCA 44083 | | | || ||| | ||| |||| || || || | ||| || || | |||||| Sbjct 194301 CAGCGCGAGTATC---TCTTTGATGCCATTGACACCATCCCTTGTATCAAGCGTAAAGCG 194245 Query 44084 GACTGGGCCCTTAAATGGATAAAT--TCAAATGATTC--TTTTGGAGAACGACTTGTCGC 44139 || |||||| | || ||||| | |||| | | | ||||| ||||| ||||| || Sbjct 194244 GAGTGGGCCTTGAAGTGGATCTCTGATCAAC-GCTCCACTTTTGCTGAACGTCTTGTGGC 194186 Query 44140 GTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAA 44199 || || | ||| || || || ||||| || || || ||||| || || || ||| | || Sbjct 194185 CTTCGCCGCTGTTGAGGGTATCTTCTTCTCTGGGTCCTTTGCCGCTATCTTCTGGATGAA 194126 Query 44200 GAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGG 44259 ||| || || | ||||| || | || |||||||| ||| | || |||||||||||||| Sbjct 194125 GAAGCGCGGCCTCATGCCGGGTCTTACCTTTTCAAACGAGCTTATCAGTCGTGATGAAGG 194066 Query 44260 CTTACATTGCGATTTTGCTTGCTTG 44284 | | || ||| || || || ||| Sbjct 194065 CATGCACACCGACTTCGCCTGTTTG 194041 Score = 93.3 bits (102), Expect = 3e-14 Identities = 284/435 (65%), Gaps = 17/435 (4%) Strand=Plus/Plus Query 43856 GCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAA 43915 ||||| || || || ||| || || || || || ||| | || ||||| | | Sbjct 196395 GCGTTCTTCGCCGCCTCCGATGGAATTGTGAACGAGAATCTCGTGGAAAGGTTTTCAAAC 196454 Query 43916 GAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATT 43975 ||||||||| | | ||||| |||| || || || || || || || || || || Sbjct 196455 GAAGTTCAAGTCGCGGAAGCGAGATGCTTCTACGGCTTCCAGATCATGATGGAGAACATC 196514 Query 43976 CATTCGGAAATGTACAGTCTTCTGATAGATACGTACATCAAAGA---TGG-GCACGAGAA 44031 || || |||| || ||| || ||||| || || | || || || | ||| | | Sbjct 196515 CACTCAGAAACCTATTCTCTGCTCATAGACACCTATGTTAAGGACCCTGACGAACGGGCA 196574 Query 44032 GCATCGATTGTTTAATGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGC 44091 |||| | ||| |||| || || || | || |||| |||| |||||| | ||||| Sbjct 196575 -CATC---TTTTTGATGCCATTGAGACCATCCCGACGATCAAACGTAAAGCCGCTTGGGC 196630 Query 44092 CCTTAAATGGATAAATTCAAATGATT------CTTTTGGAGAACGACTTGTCGCGTTTGC 44145 | ||||| |||| || | | |||| ||||| ||| | || ||||| Sbjct 196631 TTTGCGGTGGAT---TTCAGATCACAACCTCACATTTGCGGAACGTCTTATTGCATTTGC 196687 Query 44146 AGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACG 44205 | || |||||| | || || || || || || || |||||||||||| |||| ||||| Sbjct 196688 CGCGGTCGAAGGCGTGTTTTTCTCTGGTTCCTTCGCTGCCATATTTTGGATAAAAAAACG 196747 Query 44206 AGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACA 44265 || || |||||||| | || | ||| || ||| | ||| ||| || || || | || Sbjct 196748 TGGATTAATGCCTGGCCTTACCTATTCTAACGAGCTCATATCTCGCGACGAGGGAATGCA 196807 Query 44266 TTGCGATTTTGCTTG 44280 | || ||||| || Sbjct 196808 TACAGACTTTGCATG 196822 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397356906394285