Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1104 136 5e-27 seq221 84.2 3e-11 >seq1104 Length=249415 Score = 136 bits (150), Expect = 5e-27 Identities = 197/273 (72%), Gaps = 14/273 (5%) Strand=Plus/Minus Query 94672 CTCATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAA 94731 ||||| || | ||||| |||||| || || || | |||||||| ||||| | Sbjct 194331 CTCATTGATACCTATATCAAGGATCCCGCACAGCGCGAGTATCTCTTTGATGCCATTGAC 194272 Query 94732 ACAGTTCCGTGTATTCAAAAG-AAAGCGGATTGGGCTATGAAGTGGTT---TGATACAAA 94787 || | || ||||| ||| | |||||||| ||||| |||||||| | |||| ||| Sbjct 194271 ACCATCCCTTGTAT-CAAGCGTAAAGCGGAGTGGGCCTTGAAGTGGATCTCTGAT-CAA- 194215 Query 94788 GTCGCGTTCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTT 94844 || ||| |||||||| || || | || || || |||||||||||||||||| Sbjct 194214 ----CGCTCCACTTTTGCTGAACGTCTTGTGGCCTTCGCCGCTGTTGAGGGTATCTTCTT 194159 Query 94845 CTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTG 94904 |||||| ||||| |||||| | ||| | |||||||| || |||||||| ||||| Sbjct 194158 CTCTGGGTCCTTTGCCGCTATCTTCTGGATGAAGAAGCGCGGCCTCATGCCGGGTCTTAC 194099 Query 94905 CTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 ||| || |||||||||||| |||||| || || Sbjct 194098 CTTTTCAAACGAGCTTATCAGTCGTGATGAAGG 194066 Score = 91.5 bits (100), Expect = 2e-13 Identities = 287/437 (66%), Gaps = 12/437 (3%) Strand=Plus/Plus Query 94525 ATCCTGGCATTCTTTGCTGGATCCGATGGAATTGTTTTTGAGAATATCAATAACAACTTT 94584 || || || ||||| || | |||||||||||||| |||||| || | | ||| Sbjct 196389 ATACTCGCGTTCTTCGCCGCCTCCGATGGAATTGTGAACGAGAATCTCGTGGAAAGGTTT 196448 Query 94585 GCTGATGAGGTGCAATCCTCTGAAGCGAGATCCTTCTATGCGTATCAGTGTCATAATGAA 94644 | | || || ||| | | |||||||||| |||||| | | ||| |||| ||| | Sbjct 196449 TCAAACGAAGTTCAAGTCGCGGAAGCGAGATGCTTCTACGGCTTCCAGA-TCATGATGGA 196507 Query 94645 -ATGGTGCATGGGGAGACATACAGTAAACTCATAGACAAGTATATTAAGGATGGTGCTGA 94703 | | || || || || | |||||||||| ||| ||||||| || || Sbjct 196508 GAACATCCACTCAGAAACCTATTCTCTGCTCATAGACACCTATGTTAAGGACCCTGACGA 196567 Query 94704 GAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAG-AAAGCGGATT 94762 | || || ||||| ||||| | || | ||| || |||| | ||||| | || Sbjct 196568 ACGGGCACATCTTTTTGATGCCATTGAGACCATCCCGACGAT-CAAACGTAAAGCCGCTT 196626 Query 94763 GGGCTATGAAGTGGTTT---GAT-ACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCA 94818 ||||| || |||| || ||| |||| || | || ||| || || || | ||| Sbjct 196627 GGGCTTTGCGGTGGATTTCAGATCACAACCTCACATT----TGCGGAACGTCTTATTGCA 196682 Query 94819 TTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAG 94878 ||||| || || || | || ||||||||||||||| || || | |||| | || Sbjct 196683 TTTGCCGCGGTCGAAGGCGTGTTTTTCTCTGGTTCCTTCGCTGCCATATTTTGGATAAAA 196742 Query 94879 AAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGA 94938 || || || | ||||| || || || || |||||||| || ||||| ||||||||| Sbjct 196743 AAACGTGGATTAATGCCTGGCCTTACCTATTCTAACGAGCTCATATCTCGCGACGAGGGA 196802 Query 94939 CTCCACCAAGAGTTTGC 94955 | || ||| ||||| Sbjct 196803 ATGCATACAGACTTTGC 196819 >seq221 Length=834679 Score = 84.2 bits (92), Expect = 3e-11 Identities = 175/251 (70%), Gaps = 16/251 (6%) Strand=Plus/Plus Query 169201 ATCCGTCATGATCATGAGACGACCATACCGAAG-CTCGGAAACATCTTGATAGTCCTTAC 169259 ||| | ||| ||||| || || ||||| ||||| |||| | ||||| ||| || ||| Sbjct 74070 ATCAGCCATAATCATCAGGCGGCCATAGCGAAGACTCG-AGACATCCAAATAATCTTTAT 74128 Query 169260 CCTGTTGAAGACCCAAGATCTTCTTGA-GATCGTTGAACT-CTTGGTT-----TGATGTG 169312 ||||| | ||||||||||| |||| | || |||| | ||| ||| |||| || Sbjct 74129 TATGTTGCAAGCCCAAGATCTTTTTGATGTTC--TGAATTTCTTCGTTCTTCATGATCTG 74186 Query 169313 AGCTGTGTGACAGAGGCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCG 169372 | | ||| | ||| | |||||||| ||| || || || | |||||||||||| Sbjct 74187 ATC---GTGTC-GAG-CTTCGCGAACGTTCAGGAGTTTACCGCGCAAAGGGAAGACACCA 74241 Query 169373 TAGTGATCACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCC 169432 | | |||||| ||||| || || || ||||| || |||| ||| || || ||||| Sbjct 74242 AAATAATCACGCCCAACTACACCAAGCCCAGCGACAGCAAGAGCCTTAGCAGAATCACCT 74301 Query 169433 TCGGTGACGAT 169443 || || | ||| Sbjct 74302 TCCGTCAAGAT 74312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583111652922680