Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq561 122 1e-22 seq1104 104 3e-17 >seq561 Length=59160 Score = 122 bits (134), Expect = 1e-22 Identities = 217/315 (69%), Gaps = 4/315 (1%) Strand=Plus/Minus Query 78843 GTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGAT 78902 |||||| | | || ||| |||||| ||||||| || || || |||||| |||| Sbjct 46878 GTCGAAGGGCATGCGAAGCGCCATGAAAGTGTCGGCCAAACCTTGCACACCGATACCGAT 46819 Query 78903 CGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGTAAAAGTTCCGATCGAT 78962 || | ||| ||||||||| || || | | | || || |||| |||||| Sbjct 46818 AGGCCTGTGACGCATGTTGGAACGACGAGCTTCAGGGATGGGATAGTAGTTGACATCGAT 46759 Query 78963 GACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAA 79022 || ||||| ||||| | |||||| || || |||| ||| || ||| || | Sbjct 46758 GATACGGTTGAGGTTGTTGGCCACGACCTTGGTGACGTCGTGCAACTTCTTGAAGTCGTA 46699 Query 79023 ATGATTTCCTT--TGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTC 79080 | | | || ||||||| || || ||| |||||| || |||||||| ||||||||| Sbjct 46698 CT--TGCCATTCGTGATGAAGGTTGGGAGGGCCAGCGAAGCAAGGTTGCAGACGGCCGTC 46641 Query 79081 TCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCG 79140 || || || || ||||||||| || || || | ||| || |||||||||||||| Sbjct 46640 TCATCAGGCGATGAGTACTCGATGATCTCCGTACAGAGATTGGAGGACTTGATGGTGCCA 46581 Query 79141 ATGTTCTTCTGGTTG 79155 | ||||||||||||| Sbjct 46580 AGGTTCTTCTGGTTG 46566 >seq1104 Length=249415 Score = 104 bits (114), Expect = 3e-17 Identities = 336/514 (65%), Gaps = 12/514 (2%) Strand=Plus/Minus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| |||||||| | || |||||| ||| |||||| || |||||| || || | Sbjct 194591 TGTACAAGAAAGCCGAGGCATCCTTCTGGACCGCCGAGGAAATGGACCTCTCCAAGGATC 194532 Query 59653 TGAAGGATTGGGACAAGC---TCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGG 59709 || |||||| ||| | | || || |||||| || ||||| || || | Sbjct 194531 TGCGTGATTGGACCAACCGTATGAACGACAACGAGCGTCACTTCATTTCACACGTGCTCG 194472 Query 59710 CCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTC--CAA 59767 ||||||| || || ||||| ||||| | || || | | |||| |||| ||| Sbjct 194471 CCTTCTTTGCCGCCTCCGATGGCATTGTCAATGAGAACCTTGTG--GAACGTTTCTCCAA 194414 Query 59768 GGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTAT 59827 || |||||| ||| || || || | ||||| | | || | | || || Sbjct 194413 TGAAGTCCAGGCTGCTGAAGCTCGATGCTTCTATGGATTCCAAATTATGATGGAAAACAT 194354 Query 59828 CCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGC 59887 || ||||| || || || ||| | || |||| | |||||||||| | | || | Sbjct 194353 ACATTCCGAAACCTATTCCCTCCTCATTGATACCTATATCAAGGATCCCGCACAGCGCGA 194294 Query 59888 TGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCA 59946 ||| || |||||| || || |||| | | | || | ||||| || |||||| Sbjct 194293 GTATCTCTTTGATGCCATTGACACCATCCCTTGTA-TCAAGCGTAAAGCGGAGTGGGCCT 194235 Query 59947 TGCAGTGGATGAGTCCTGGA-GCATCA--TTTGCACAACGTCTCATAGCTTTTGCATGCG 60003 || ||||||| | | | || || ||||| ||||||| | || || || | Sbjct 194234 TGAAGTGGATCTCTGATCAACGCTCCACTTTTGCTGAACGTCTTGTGGCCTTCGCCGCTG 194175 Query 60004 TGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCC 60063 | || || |||||||||||||| || || ||||| |||||| | || ||||| |||| Sbjct 194174 TTGAGGGTATCTTCTTCTCTGGGTCCTTTGCCGCTATCTTCTGGATGAAGAAGCGCGGCC 194115 Query 60064 TCATGCCGGGCCTGAGTTTCTCCAACGAGCTGAT 60097 |||||||||| || | || || |||||||| || Sbjct 194114 TCATGCCGGGTCTTACCTTTTCAAACGAGCTTAT 194081 Score = 96.9 bits (106), Expect = 4e-15 Identities = 280/429 (65%), Gaps = 3/429 (1%) Strand=Plus/Plus Query 59706 CTGGCCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCC 59765 || || |||||||| || ||||||||||||| || ||| | | | ||||| Sbjct 196392 CTCGCGTTCTTCGCCGCCTCCGATGGAATTGTGAACGAGAATCTCGTGGAAAGGTTTTCA 196451 Query 59766 AAGGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCT 59825 || || || || | || || || | | ||||||| | ||| | | ||| Sbjct 196452 AACGAAGTTCAAGTCGCGGAAGCGAGATGCTTCTACGGCTTCCAGATCATGATGGAGAAC 196511 Query 59826 ATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAG 59885 |||||||| || || || || || | || || | | || ||||| || || || | Sbjct 196512 ATCCACTCAGAAACCTATTCTCTGCTCATAGACACCTATGTTAAGGACCCTGACGAACGG 196571 Query 59886 GCTGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCC 59945 || ||| || |||||| ||||| ||| | | |||| ||||| | ||||| Sbjct 196572 GCACATCTTTTTGATGCCATTGAGACCATCCCGACGATCAAACGTAAAGCCGCTTGGGCT 196631 Query 59946 ATGCAGTGGA--TGAGTCCTGGAGC-ATCATTTGCACAACGTCTCATAGCTTTTGCATGC 60002 ||| ||||| | || | | | ||||||| ||||||| || || ||||| Sbjct 196632 TTGCGGTGGATTTCAGATCACAACCTCACATTTGCGGAACGTCTTATTGCATTTGCCGCG 196691 Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 || ||||| | || |||||||| || ||| ||| || || ||| | ||||| ||||| Sbjct 196692 GTCGAAGGCGTGTTTTTCTCTGGTTCCTTCGCTGCCATATTTTGGATAAAAAAACGTGGA 196751 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAG 60122 | ||||| ||||| | | || |||||||| || || || |||||||| | ||| Sbjct 196752 TTAATGCCTGGCCTTACCTATTCTAACGAGCTCATATCTCGCGACGAGGGAATGCATACA 196811 Query 60123 GAGTTTGCA 60131 || |||||| Sbjct 196812 GACTTTGCA 196820 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548384535352080