Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1104 116 4e-21 seq221 87.8 2e-12 >seq1104 Length=249415 Score = 116 bits (128), Expect = 4e-21 Identities = 281/423 (66%), Gaps = 17/423 (4%) Strand=Plus/Minus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || || ||| | | |||||||||||| | |||||| || || | |||||| |||||| | Sbjct 196780 TCGTTAGAATAGGTAAGGCCAGGCATTAATCCACGTTTTTTTATCCAAAATATGGCAGCG 196721 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 ||||||||| ||| || | ||||||||| ||||| || | ||| |||| ||| || Sbjct 196720 AAGGAACCAGAGAAAAACACGCCTTCGACCGCGGCAAATGCAATAAGACGTTCCGCAAAT 196661 Query 74910 G-------GTGCATCGGAAGTCATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGC 74962 | ||| ||| ||| ||||| | |||||| | ||||| ||||||| || Sbjct 196660 GTGAGGTTGTG-ATCTGAA---ATCCACCGCAAAGCCCAAGCGGCTTTACGTTTGATCGT 196605 Query 74963 AGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTT 75022 |||| || || || || | || || |||| || || || ||||| || | Sbjct 196604 CGGGATGGTCTCAATGGCATCAAAAAGATGTGCCCGTTCGTCAGGGTCCTTAACATAGGT 196545 Query 75023 GTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTA 75082 ||| || | || || || || || || || || ||| | | |||| | |||| Sbjct 196544 GTCTATGAGCAGAGAATAGGTTTCTGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTA 196485 Query 75083 GAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAATTCATGTCGATATTCTCCAT 75142 ||| | | ||| || || | || || || |||||||| | ||| |||||| | Sbjct 196484 GAAGCATCTCGCTTCCGCGACTTGAACTTCGTTTGAAAACCTTTCCACGAGATTCTCGTT 196425 Query 75143 GACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTT---TGATAAAGTGGCGCTC 75199 || || || || ||||||||||| || || ||| |||| |||||| ||||||| Sbjct 196424 CACAATTCCATCGGAGGCGGCGAAGAACGCGAGT---ATTTGCGAGATAAATCGGCGCTC 196368 Query 75200 ATC 75202 || Sbjct 196367 GTC 196365 Score = 104 bits (114), Expect = 3e-17 Identities = 333/509 (65%), Gaps = 16/509 (3%) Strand=Plus/Plus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||||||||| | || || | || || ||||| | ||| || ||||| || || ||||| Sbjct 194065 GCCTTCATCACGACTGATAAGCTCGTTTGAAAAGGTAAGACCCGGCATGAGGCCGCGCTT 194124 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||||| ||| ||||| || ||||| ||| ||||||||| || || ||| || || Sbjct 194125 CTTCATCCAGAAGATAGCGGCAAAGGACCCAGAGAAGAAGATACCCTCAACAGCGGCGAA 194184 Query 74888 GGCGACAAGGCGTTGCGCGAACGGTGCATCG--GA--AGTCATCCAAGTCTGAGCCCATT 74943 ||| ||||| |||| || || | || | || || || ||||| || ||||| | Sbjct 194185 GGCCACAAGACGTTCAGCAAAAG-TGGAGCGTTGATCAGAGATCCACTTCAAGGCCCACT 194243 Query 74944 CAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAGG--CTTGCCTTCTC 75001 | ||||| || |||| ||||| || || || || | ||||| || || || Sbjct 194244 CCGCTTTACGCTTGATACAAGGGATGGTGTCAATGGCATCAAAGAGATACTCGCG--CTG 194301 Query 75002 TTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTC 75061 | |||||||||||| | ||||| | || || || || || ||||| || || Sbjct 194302 TGCGGGATCCTTGATATAGGTATCAATGAGGAGGGAATAGGTTTCGGAATGTATGTTTTC 194361 Query 75062 GTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAA 75121 | | ||| | | ||||| | || || || ||| ||| || || || || || Sbjct 194362 CATCATAATTTGGAATCCATAGAAGCATCGAGCTTCAGCAGCCTGGACTTCATTGGAGAA 194421 Query 75122 A--TTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACC 75179 | ||| | | ||||| |||| ||||| || |||||||| || || || || || Sbjct 194422 ACGTTC--CACAAGGTTCTCATTGACAATGCCATCGGAGGCGGCAAAGAAGGCGAGCACG 194479 Query 75180 ATTTTGATAAAGTGGCGCTCATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCC 75236 | || ||||| ||||| | ||| | | | ||| |||||| ||| ||| Sbjct 194480 TGTGAAATGAAGTGACGCTCGTTGTCGTTCATACGGTTGGTCCAATCACGCAGATCCTTG 194539 Query 75237 GCCAAATCAATCTCCTCGACCGTCCAGAA 75265 | | || || |||||| | |||||||| Sbjct 194540 GAGAGGTCCATTTCCTCGGCGGTCCAGAA 194568 >seq221 Length=834679 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/110 (79%), Gaps = 2/110 (2%) Strand=Plus/Plus Query 153845 AAACGTTAGCCAACTTGGCACCGTAACCATTGCGACCGCCCGTCACGCGT-TGTTCCTCG 153903 ||| ||| || | ||||||||||||||| || ||||| || || | || | | ||| || Sbjct 75289 AAATGTTGGCGAGCTTGGCACCGTAACCGTTACGACCTCCAGTGA-GCTTCTTTTCGTCA 75347 Query 153904 TCGTTGTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGTTCAGGGAT 153953 |||| ||||||||| | ||||||||| |||||||||||||| ||||| Sbjct 75348 TCGTCATAGTTGGAGGACGACAAAAGGTGACCAAAGATGAGTTCCGGGAT 75397 Score = 86.0 bits (94), Expect = 7e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 119083 GTTGGCTAGCTTGGCACCGTATCCGTTCCGACCACCGGTCACGCGCTGCTCCTCGTCGTT 119142 |||||| |||||||||||||| ||||| ||||| || || | || || || |||| Sbjct 75293 GTTGGCGAGCTTGGCACCGTAACCGTTACGACCTCCAGTGAGCTTCTTTTCGTCATCGTC 75352 Query 119143 GTAGTTGGAGCTGGTCAAAAGGTGCCCAAAGATGAGCTCGGGGAT 119187 ||||||||| | ||||||||| ||||||||||| || ||||| Sbjct 75353 ATAGTTGGAGGACGACAAAAGGTGACCAAAGATGAGTTCCGGGAT 75397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547076070028600