Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq221 170 4e-37 seq1326 95.1 3e-14 seq433 89.7 1e-12 >seq221 Length=834679 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| ||||| ||||| || |||||||| || || | |||||| | |||||| Sbjct 212560 AGGACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGACCATCT 212619 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || || ||||| || |||||||| || |||||||| || ||||||| || ||||| ||| Sbjct 212620 TCGAGTTGCTTTCCAGCGAAGATGAGACGTTGTTGATCGGGAGGAATACCCTCCTTATCC 212679 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || || || ||||| || || ||| || ||||| || || || ||| Sbjct 212680 TGGATCTTTGCCTTTACATTGTCGATAGTATCGGAGGACTCGACCTCAAGGGTAATAGTC 212739 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||||||||| ||||| | |||||| Sbjct 212740 TTGCCAGTGAGAGTCTTGACAAAAATCTGCAT 212771 Score = 159 bits (176), Expect = 8e-34 Identities = 160/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||||||| || ||| ||| || || ||||| || || | | ||| | ||||| |||| Sbjct 212336 CAAGGTGGAGGGTGCTCTCCTTCTGAATGTTGTAGTCGGACAAGGTACGACCATCCTCCA 212395 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||| || || |||||||||||||| || || ||||| || | || ||||||||||| | Sbjct 212396 GCTGTTTACCAGCGAAGATAAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAA 212455 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| |||||||| |||||||| ||||| ||| || || ||||| |||||||| | Sbjct 212456 TCTTCGCCTTCACGTTGTCGATGGTATCAGACGATTCGACTTCCAGAGTAATCGTCTTGC 212515 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||| ||||| || || | |||||| Sbjct 212516 CCGTGAGGGTCTTGACGAAAATCTGCAT 212543 Score = 102 bits (112), Expect = 2e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| ||||||||||| || || |||||||| |||| |||||| | || || Sbjct 213064 AGAACGAGGTGGAGAGTGGACTCCTTCTGAATGTTATAGTCCGAAAGGGTACGCCCGTCC 213123 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || ||||||||||| |||||||| | ||| |||||||| ||||| Sbjct 213124 TCGAGCTGCTTGCCAGCGAAGATCAAGCGCTGTTGGTCGGGAGG 213167 Score = 84.2 bits (92), Expect = 5e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGT-TTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTC 211069 || ||||||||||| || ||| || || ||||| |||||||| |||||| || ||||| Sbjct 213228 CCCTCCTTGTCCTGAAT-TTTGGTCTTGACGTTATCGATGGTATCAGAGGACTCGACCTC 213286 Query 211070 GAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 |||||||| ||||| || || || || || ||||| | |||||| Sbjct 213287 AAGAGTGATGGTCTTGCCGGTAAGGGTTTTAACAAAAATCTGCAT 213331 >seq1326 Length=38599 Score = 95.1 bits (104), Expect = 3e-14 Identities = 92/117 (79%), Gaps = 1/117 (1%) Strand=Plus/Plus Query 211001 AGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT 211060 |||| ||| ||| |||||||||||||||| || ||||| ||||||||||| || Sbjct 15829 AGGACTAACCCCT-CCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGA 15887 Query 211061 TTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| || ||||||||||| ||||| || ||||| ||||| | |||||| || Sbjct 15888 CTCCACCTCAAGGGTGATCGTCTTCCCCGTAAGGGTCTTGACAAAAATCTGCATCTT 15944 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 |||||||| || | || ||||| || || ||||||||||| ||||| | ||||| Sbjct 15679 AGGACAAGATGCAATGTCGACTCCTTCTGAATGTTATAATCGCTGAGGGTACGGCCATCC 15738 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 || |||||||| || |||||||||||||| || ||||| ||||| Sbjct 15739 TCAAGCTGCTTTCCGGCGAAGATAAGGCGCTGCTGGTCGGGAGG 15782 >seq433 Length=308476 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | || |||||||| | || || || ||||| ||||||||||| || || Sbjct 237808 ACGAAGGCGAAGCACAAGGTGCAAGGTAGATTCCTTTTGAATGTTATAATCGCTGAGAGT 237749 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 | ||||| || ||||||||||| |||||||| || ||||||||||| || || Sbjct 237748 GCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGTTGTTGGTCGGGGGG 237695 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1158848180102805