Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucoagaricus_20sp._20SymC.cos_20[genbank_20GCA_5F001563735.1_202016 -02-25] 20,457 sequences; 119,028,496 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq221 178 3e-39 seq1104 111 3e-19 seq684 98.7 2e-15 seq1326 95.1 3e-14 seq433 87.8 4e-12 >seq221 Length=834679 Score = 178 bits (196), Expect = 3e-39 Identities = 176/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| ||||| |||| || | || || || |||||||||||||||| Sbjct 212544 ACCACCACGCAGACGAAGGACCAAGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCAGA 212603 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| ||||| ||||| || ||||| || || || ||||| | ||||||||| || || Sbjct 212604 AAGGGTGCGACCATCTTCGAGTTGCTTTCCAGCGAAGATGAGACGTTGTTGATCGGGAGG 212663 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 |||||||||||| || ||||||||||| ||||| | |||||||| || || | ||||| Sbjct 212664 AATACCCTCCTTATCCTGGATCTTTGCCTTTACATTGTCGATAGTATCGGAGGACTCGAC 212723 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || || ||||| || || | |||||| || || |||||||| Sbjct 212724 CTCAAGGGTAATAGTCTTGCCAGTGAGAGTCTTGACAAAAATCTGCAT 212771 Score = 152 bits (168), Expect = 1e-31 Identities = 154/198 (78%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 282903 GTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTCTAGTTGTTTCCC 282961 ||||| || || || ||||||||||| | |||| || || |||||||| || ||||| || Sbjct 212347 GTGCTCTCCTTCTGAATGTTGTAGTCGGACAAG-GTACGACCATCCTCCAGCTGTTTACC 212405 Query 282962 GGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTT 283021 || ||||| | || || || ||| || |||||||||||||| || ||||| || || Sbjct 212406 AGCGAAGATAAGGCGCTGCTGATCAGGGGGGATACCCTCCTTGTCCTGAATCTTCGCCTT 212465 Query 283022 TACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGT 283081 ||| | ||||| || || || | ||||||||| ||||| |||||||| ||||| | || Sbjct 212466 CACGTTGTCGATGGTATCAGACGATTCGACTTCCAGAGTAATCGTCTTGCCCGTGAGGGT 212525 Query 283082 CTTAACGAATATCTGCAT 283099 ||| ||||| |||||||| Sbjct 212526 CTTGACGAAAATCTGCAT 212543 Score = 89.7 bits (98), Expect = 1e-12 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| || | || || || ||||||||||| || | Sbjct 212772 ACCACCACGAAGACGGAGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAATCCGA 212831 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 ||| ||||| |||||||| || ||||| ||||||||||||| |||||| || || Sbjct 212832 AAGAGTGCGACCATCCTCAAGCTGTTTGCCGGCAAAGATCAGACGTTGCTGATC 212885 >seq1104 Length=249415 Score = 111 bits (122), Expect = 3e-19 Identities = 135/183 (74%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 ||||| || |||||||||||||| ||| | || || || ||||| || ||||| ||| | Sbjct 193883 CTTATTGGAATGAATGCTGATCTGATGTGTCAGTACATTGAATTTGTGGCTGACCGTCTC 193824 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| | || || | ||||| || ||| || | |||||||||| || ||||| Sbjct 193823 CTCGTATCTCTTGGTAATGAGAAGGTCTATGACAAGACCAACCCCTTCGACTTCATGGAC 193764 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATC-AAAG 230401 | ||||| || ||||| || || ||||||||||| ||||| || ||| || | |||| Sbjct 193763 ATGATTTCCCTTCAGGGTAAGACCAACTTCTTCGAGAAGCGCGTGTCCGACTACCAAAAG 193704 Query 230402 GCC 230404 ||| Sbjct 193703 GCC 193701 Score = 95.1 bits (104), Expect = 3e-14 Identities = 131/182 (72%), Gaps = 1/182 (1%) Strand=Plus/Plus Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 |||||||||||||| | | || ||| | ||||| || || ||||| ||||| ||| | Sbjct 196985 CTTATCGGCATGAACTCCAAGCTAATGCGTCAATACATTGAGTTCGTCGCTGACCGTCTA 197044 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 | || | || || |||||||| || || ||| || ||||||| ||| ||||| Sbjct 197045 CTTGTATCTCTTGGCAACGAGAAACATTACGACGCCACCAATCCCTTCGATTTCATGGAA 197104 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTAT-CAAAG 230401 | || || || || || ||| | |||||||||||||| || || |||||| ||||| Sbjct 197105 ATGATCTCGCTACAAGGAAAAGCCAACTTCTTCGAAAAACGCGTATCGGATTATGCAAAG 197164 Query 230402 GC 230403 || Sbjct 197165 GC 197166 >seq684 Length=87918 Score = 98.7 bits (108), Expect = 2e-15 Identities = 133/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 43984 CAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGACT 44043 ||||| || || || || | ||||| |||||| ||||| || |||| |||| || Sbjct 29654 CAAGCTTCCACTTCTGAACTTTACGGCAAGGTTGTGGAGACACCGCAAAGTGAAACAACG 29595 Query 44044 CCGTTTTATCCCCGGAGTCCATATGG-TGTGGCGAAGCTATATGCCTATTGGATTTGTAA 44102 || ||||||||||| ||| ||||| ||| ||||| || |||| ||||||||| Sbjct 29594 CCTTTTTATCCCCGTTCTCCTTATGGATGT-GCGAAACTGTATGGGTATTGGATTACAGT 29536 Query 44103 AAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGAAAG 44162 |||||||| ||||| |||||||||| ||||| ||||| || ||||| || || Sbjct 29535 GAATTATCGAGAGTCATATGGGATGTATACGTGTAACGGGATTTTGTTTAATCATGAGAG 29476 Query 44163 TCC 44165 ||| Sbjct 29475 TCC 29473 >seq1326 Length=38599 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| || || ||| | ||||| ||||| |||| || || || Sbjct 15838 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCA 15897 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || ||||||||||| ||||| | ||||| || || |||||||| || Sbjct 15898 AGGGTGATCGTCTTCCCCGTAAGGGTCTTGACAAAAATCTGCATCTT 15944 >seq433 Length=308476 Score = 87.8 bits (96), Expect = 4e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| |||||||| || || || || || ||| ||||| ||||| || || Sbjct 237813 CCGCCACGAAGGCGAAGCACAAGGTGCAAGGTAGATTCCTTTTGAATGTTATAATCGCTG 237754 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 || |||||||||||||| || || || || || ||||||| |||||||||||| Sbjct 237753 AGAGTGCGGCCATCCTCGAGCTGCTTGCCAGCGAAGATCAGACGTTGTTGGTC 237701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046464844094878