Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leucosporidium_20creatinivorum_20[genbank_20GCA_5F001600635.1_202016 -03-01] 122 sequences; 27,969,159 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq20 179 4e-40 seq1 138 1e-27 seq6 116 4e-21 seq11 114 1e-20 seq13 98.7 1e-15 seq25 95.1 1e-14 >seq20 Length=589438 Score = 179 bits (198), Expect = 4e-40 Identities = 179/230 (78%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 116640 GGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCA 116699 |||||| |||||| ||||| ||||| || |||||||||| ||| ||| ||||||| |||| Sbjct 425894 GGCGCA-GTACAAGAAGGCTGAGGCCTCCTTCTGGACCGCCGAAGAGATGGACCTTTCCA 425836 Query 116700 AGGACACGAGCGACTGGGAGCGCTTG---AACGACAACGAGCGCCATTTCATCAAGCACG 116756 |||||| | ||||||||| | | || || |||||||| | || ||| |||||| Sbjct 425835 AGGACATGCACGACTGGGACAACAAGCTCAAGGAGGACGAGCGCTACTTTATCCAGCACG 425776 Query 116757 TGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCG 116816 | || ||||| |||||||| || || |||||||||||||| ||| ||||||| ||| Sbjct 425775 TCCTCGCCTTCTTCGCCGCTTCGGATGGTATCGTCAACGAGAACCTGCTCGAGCGCTTCT 425716 Query 116817 CTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 | ||||||||| |||||||| || ||||||||||| || |||||| Sbjct 425715 CGTCCGAGGTGCAGTGCGCCGAGGCTCGTTGCTTCTACGGATTCCAGATC 425666 Score = 131 bits (144), Expect = 2e-25 Identities = 200/280 (71%), Gaps = 4/280 (1%) Strand=Plus/Minus Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAAC 117145 |||||| |||| || ||||||||||| ||||||||||||||||| || || ||| |||| Sbjct 425248 TTCGCCTCCATCTTCTGGCTCAAGAAGCGCGGCCTCATGCCCGGACTCACCTTCTCCAAC 425189 Query 117146 GAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT 117205 ||||||||||| | ||||| || || || |||||||||||| | ||||| ||| Sbjct 425188 GAGCTCATCTCGCGCGACGAAGGCCTTCACACCGACTTTGCCTGCCTCATGTTCTCTCAT 425129 Query 117206 TTGGTGCAGCGACC-GAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCAT 117264 | | || || || | | || | | |||| | |||| || ||| || |||| || Sbjct 425128 CTCGAGCGTCGCCCTCACCCCGACAC-CGTCGAGATGATCATCCGCGAGGCCGTCGAGAT 425070 Query 117265 CGAGCAGCGCTTCCTCACCGAAGCGCTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAAC 117324 ||| || ||||||||||| || || || || || | ||| | || || | | Sbjct 425069 TGAGAAGGAGTTCCTCACCGAGGCCCTCCCCGTCTCCCTCATCGGAATGAA-CGCCACCC 425011 Query 117325 -GATGTCGCAATACATCGAGTTCGTCGCCGACAGGCTGCT 117363 |||| || ||||||||||||||||||||| | || || Sbjct 425010 TCATGTGCCAGTACATCGAGTTCGTCGCCGACCGCCTCCT 424971 >seq1 Length=1866479 Score = 138 bits (152), Expect = 1e-27 Identities = 140/180 (78%), Gaps = 2/180 (1%) Strand=Plus/Plus Query 40717 GGCAAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAA 40775 || || ||| ||||||||| |||| || |||||||| | | |||| |||||| || Sbjct 726882 GGAAAGACCCTCACCGTCGCGGTCGTGTCCTCCGACAGCATCGACAACG-TCAAGGCCAA 726940 Query 40776 AATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACA 40835 || ||||| ||||||||||| ||||||||||| || ||||||| ||| ||||| || Sbjct 726941 GATCGAGGACAAGGAGGGCATCCCTGCGGACCAGCAGCGTCTCATCTTCGCCGGCAAGCA 727000 Query 40836 GCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCT 40895 ||| || |||| |||||||| ||||||||||||||||||||| | ||||| || || Sbjct 727001 GCTCGAGGACGGCTGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACGCTCCACCT 727060 >seq6 Length=1242253 Score = 116 bits (128), Expect = 4e-21 Identities = 136/181 (75%), Gaps = 2/181 (1%) Strand=Plus/Plus Query 40720 AAAACCATCACCGTCGACGTCGAAGCCACCGACAGCGTGCA-AACGCTCAAGGAAAAAAT 40778 || ||||||||| |||| ||||| | |||||| | | |||| | |||| || || Sbjct 238578 AAGACCATCACCCTCGAGGTCGAGTCGTCCGACACGATCGACAACGTT-AAGGCCAAGAT 238636 Query 40779 TCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCT 40838 | ||||| ||||||||||| | |||||||| || | |||| ||| ||||| ||||| Sbjct 238637 CCAGGACAAGGAGGGCATCCCTCCCGACCAGCAGCGTTTGATCTTCGCCGGCAAGCAGCT 238696 Query 40839 GGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || |||| ||||||||| ||||||||||||||||||||| | || || || || || Sbjct 238697 CGAGGACGGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTTCACCTCGT 238756 Query 40899 G 40899 | Sbjct 238757 G 238757 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 40783 GACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGAC 40842 ||||| ||||||||||| | |||||||| || | |||| ||| ||||| ||||| || Sbjct 237645 GACAAGGAGGGCATCCCTCCCGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGCTCGAG 237704 Query 40843 GACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCATCTAGTG 40899 |||| |||||||| || |||||||||||||||||| | || || || || ||| Sbjct 237705 GACGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCGACCCTCCACCTCGTG 237761 >seq11 Length=836129 Score = 114 bits (126), Expect = 1e-20 Identities = 169/232 (73%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 116640 GGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCA 116699 |||| |||||||| || || | || || || ||||| | ||| ||| | |||||| | Sbjct 271285 GGCG-ATGTACAAGAAAGCGCAAGCCTCCTTTTGGACAGCCGAAGAGATCGACCTGGGCG 271343 Query 116700 AGGACACGAG-CGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAGCAC 116755 ||| | || ||||||| | || | |||||| |||||||| | ||| | || Sbjct 271344 GCGAC-CTAGTCGACTGGAACACTCGGCTCAACGACGACGAGCGCTACTTCGTTTCCCAT 271402 Query 116756 GTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTC 116815 || || ||||| ||| | || || ||||||||||| ||||||||||| ||| | ||| Sbjct 271403 GTCCTCGCCTTCTTCTCGGCGTCGGATGGCATCGTCAATGAGAATCTGGTGGAGAGGTTC 271462 Query 116816 -GCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATC 116866 |||| ||||||||| ||||||||| |||||||||| || || |||||| Sbjct 271463 AGCTC-CGAGGTGCAGTGTGCCGAGGCGAGGTGCTTCTATGGGTTCCAGATC 271513 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 117086 TTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAAC 117145 |||||| |||| ||||||||||| || || |||||||||||||| || ||| |||| Sbjct 271960 TTCGCCTCCATCTTTTGGCTCAAAAAGCGAGGCCTCATGCCCGGTCTCTGCTTCTCCAAC 272019 Query 117146 GAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCAT 117205 || |||||||| ||||||| || ||||| ||| || || || | || |||| ||| Sbjct 272020 GAACTCATCTCACGGGACGAAGGGCTGCACACCGATTTCGCTTGCCTCCTCTTCACCCAT 272079 Query 117206 TTGGTGCAGCGACCGAGCGCGGCGCGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATC 117265 ||| || ||||| | ||| ||| | ||||| | || || || | || Sbjct 272080 TTGAACCATCGACCATCAGAAGCGACTGTCTCTGCCATCGTGAGGGAAGCAGTAGAGATT 272139 Query 117266 GAGCAGCGCTTCCTCACCGAAGCGCTGCCGGT 117297 ||| || ||| | | ||| ||||||||||| Sbjct 272140 GAGAAGGAGTTCTTGAGCGAGGCGCTGCCGGT 272171 >seq13 Length=743395 Score = 98.7 bits (108), Expect = 1e-15 Identities = 98/127 (77%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825 |||||| || || | ||||| ||||| || ||| | || ||||| || ||||||| || Sbjct 147130 TCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCTGATCAGCAGCGTCTCATCTTCG 147071 Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885 | ||||| ||||| || |||| |||||||| ||||||||||||||||||||| | | Sbjct 147070 CCGGCAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAACATCCAGAAGGAGTCGA 147011 Query 40886 CGCTGCA 40892 | || || Sbjct 147010 CCCTTCA 147004 >seq25 Length=440178 Score = 95.1 bits (104), Expect = 1e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 40766 TCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAGCAACGACTCATCTACG 40825 |||||| || || | ||||| ||||| || ||| | |||||||| || ||||||| || Sbjct 156371 TCAAGGCCAAGATCCAGGACAAGGAGGGAATTCCCCCCGACCAGCAGCGTCTCATCTTCG 156430 Query 40826 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAAGGAGGCCA 40885 | ||||| ||||| || || | |||||||| || |||||||||||||||||| | | Sbjct 156431 CCGGCAAGCAGCTCGAGGATGGCCGCACCCTTTCGGATTACAACATCCAGAAGGAGTCGA 156490 Query 40886 CGCTGCA 40892 | || || Sbjct 156491 CCCTCCA 156497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218414290720